Detailed information of gene00404.t2 in Actinoscyphia liui

Genomic Location: chr1:1931636...2031404
NR annotation: XP_020898486.1, A-kinase anchor protein 13 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8N1W1Rho guanine nucleotide exchange factor 28 OS=Homo sapiens OX=9606 GN=ARHGEF28 PE=1 SV=3
P97433Rho guanine nucleotide exchange factor 28 OS=Mus musculus OX=10090 GN=Arhgef28 PE=1 SV=2
P0C6P5Rho guanine nucleotide exchange factor 28 OS=Rattus norvegicus OX=10116 GN=Arhgef28 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001928 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan
PF17838
all species →
PH_16PH domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR051632
all species →
FamilyRho guanine nucleotide exchange factorInterproscan
IPR001849
all species →
DomainPleckstrin homology domainInterproscan
IPR041020
all species →
DomainARHGEF1-like, PH domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13944
all species →
AGAP007712-PAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0035023
all species →
Biological Processregulation of Rho protein signal transductionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene00404.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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