Detailed information of gene00488.t1 in Actinoscyphia liui

Genomic Location: chr1:3756746...3768006
NR annotation: XP_020914313.1, LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 45-like [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O08700Vacuolar protein sorting-associated protein 45 OS=Rattus norvegicus OX=10116 GN=Vps45 PE=1 SV=1
P97390Vacuolar protein sorting-associated protein 45 OS=Mus musculus OX=10090 GN=Vps45 PE=1 SV=1
Q9NRW7Vacuolar protein sorting-associated protein 45 OS=Homo sapiens OX=9606 GN=VPS45 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0005486 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00995
all species →		Sec1Sec1 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001619
all species →		FamilySec1-like proteinInterproscan
IPR036045
all species →		Homologous_superfamilySec1-like superfamilyInterproscan
IPR027482
all species →		Homologous_superfamilySec1-like, domain 2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11679
all species →		VESICLE PROTEIN SORTING-ASSOCIATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016192
all species →		Biological Processvesicle-mediated transportInterproscan
GO:0000139
all species →		Cellular ComponentGolgi membraneInterproscan
GO:0006886
all species →		Biological Processintracellular protein transportInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene00488.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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