Detailed information of gene00510.t2 in Actinoscyphia liui

Genomic Location: chr1:4203606...4248749
NR annotation: no NCBI-NR hit recorded
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF12662
all species →		cEGFComplement Clr-like EGF-likeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR050751
all species →		FamilyExtracellular matrix structural proteinInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR026823
all species →		DomainComplement Clr-like EGF domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034
all species →		EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K23342FBN2_3; fibrillin 2/3-Glycosaminoglycan binding proteinsko00536deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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