Detailed information of gene00933.t1 in Actinoscyphia liui

Genomic Location: chr1:13047909...13056877
NR annotation: XP_031568636.1, low-density lipoprotein receptor 1-like isoform X1 [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001020 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00057
all species →		Ldl_recept_aLow-density lipoprotein receptor domain class ARepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002172
all species →		RepeatLow-density lipoprotein (LDL) receptor class A repeatInterproscan
IPR036055
all species →		Homologous_superfamilyLDL receptor-like superfamilyInterproscan
IPR050685
all species →		FamilyLow-density lipoprotein receptorInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24270
all species →		LOW-DENSITY LIPOPROTEIN RECEPTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0005886
all species →		Cellular Componentplasma membraneInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene00933.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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