Genomic Location: chr1:15144433...15145826
NR annotation: KAJ8369569.1, hypothetical protein SKAU_G00095970 [Synaphobranchus kaupii]
Species Actinoscyphia liui · all data for this species · gene families
| CDS |
| gene01072.t1 |
| Transcript |
| gene01072.t1 |
| Protein |
| gene01072.t1 |
| UniProt accession | Description |
|---|---|
| O92815 | Gag-Pol polyprotein OS=Walleye dermal sarcoma virus OX=39720 GN=gag-pol PE=1 SV=2 |
| A4FUB7 | Gypsy retrotransposon integrase-like protein 1 OS=Bos taurus OX=9913 GN=GIN1 PE=2 SV=1 |
| Q66H30 | Gypsy retrotransposon integrase-like protein 1 OS=Rattus norvegicus OX=10116 GN=GIN1 PE=2 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000010 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17921 all species → | Integrase_H2C2 | Integrase zinc binding domain | Domain | Interproscan |
| PF00665 all species → | rve | Integrase core domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR052160 all species → | Family | Gypsy Retrotransposon Integrase-like | Interproscan |
| IPR012337 all species → | Homologous_superfamily | Ribonuclease H-like superfamily | Interproscan |
| IPR041588 all species → | Domain | Integrase zinc-binding domain | Interproscan |
| IPR036397 all species → | Homologous_superfamily | Ribonuclease H superfamily | Interproscan |
| IPR001584 all species → | Domain | Integrase, catalytic core | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR47266 all species → | ENDONUCLEASE-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003676 all species → | Molecular Function | nucleic acid binding | Interproscan |
| GO:0015074 all species → | Biological Process | DNA integration | Interproscan |
gene01072.t1.
