Detailed information of gene01174.t2 in Actinoscyphia liui

Genomic Location: chr1:17162962...17171092
NR annotation: XP_028513821.1, bifunctional polynucleotide phosphatase/kinase, partial [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q19683Uncharacterized protein F21D5.5 OS=Caenorhabditis elegans OX=6239 GN=F21D5.5 PE=2 SV=2
Q9JLV6Bifunctional polynucleotide phosphatase/kinase OS=Mus musculus OX=10090 GN=Pnkp PE=1 SV=2
Q96T60Bifunctional polynucleotide phosphatase/kinase OS=Homo sapiens OX=9606 GN=PNKP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002702 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13671
all species →
AAA_33AAA domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12083
all species →
BIFUNCTIONAL POLYNUCLEOTIDE PHOSPHATASE/KINASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003690
all species →
Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan
GO:0046403
all species →
Molecular Functionpolynucleotide 3'-phosphatase activityInterproscan
GO:0046404
all species →
Molecular FunctionATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activityInterproscan
GO:0046939
all species →
Biological Processobsolete nucleotide phosphorylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene01174.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP