Detailed information of gene01566.t1 in Actinoscyphia liui

Genomic Location: chr1:24353273...24363633
NR annotation: XP_031572332.1, calretinin-like isoform X2 [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P22676Calretinin OS=Homo sapiens OX=9606 GN=CALB2 PE=1 SV=2
Q3ZBY3Calretinin OS=Bos taurus OX=9913 GN=CALB2 PE=2 SV=1
P07090Calretinin OS=Gallus gallus OX=9031 GN=CALB2 PE=2 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001318 (this species only)

 Pfam domain
No Pfam domain signature was detected for gene01566.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR018247
all species →
Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR051001
all species →
FamilyCalbindin Calcium-BindingInterproscan
IPR002048
all species →
DomainEF-hand domainInterproscan
IPR011992
all species →
Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19972
all species →
CALBINDINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005829
all species →
Cellular ComponentcytosolInterproscan
GO:0043005
all species →
Cellular Componentneuron projectionInterproscan
GO:0045202
all species →
Cellular ComponentsynapseInterproscan
GO:0051480
all species →
Biological Processregulation of cytosolic calcium ion concentrationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene01566.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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