Gene detail

Detailed information of gene02074.t1 in Actinoscyphia liui

Genomic Location: chr1:32433759...32453650
NR annotation: XP_020893265.1, guanine nucleotide-binding protein G(o) subunit alpha [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene02074.t1

GGTTGAAGTCTGCTATTTTCTACCTGTGATTTTAACTTAAGCAGCCATCATAGCTTGGCTCCCTTTTCAGAATGGGTTGCACTTTAAGTGCAGAAGAACGAGCTGCCATTGCAAGGAGTAGAGCCATTGAGAAAAATCTCAAACTCGAAGGTGCTCGGGCGGAAAGGGATGTGAAACTGTTGTTACTTGGTGCAGGAGAGTCGGGAAAGAGTACAATTGTCAAGCAAATGAGGATCATACACGATCATGGCTTTTCACCAGAAGATTACAGGCAGTACAAGCCTTTAGTGTTTAGCAATACGATTTACTCGTTACTAACTATTATTCGTGCTATGGACAAGCTACGAATTGATTTTGAAAACGACGAAAGGCTGATGGATGCCAAAATGGTGTTCGATGTTATAGCAAGGGCAGATGATACTGAACCATTTGCTCCTGAATTAACCGAATCAATGCAACGGCTATGGGAAGACAAGGGTGTACAAGAGTGTTTTAGTCGATCGAGAGAATACCAACTTGGGGATTCAGCAAAATACTATTTAGATTCGTTGGAAAGAATAGGAGCAAAAAATTATGAAGCCACAGAACAAGATCTTCTTAGAACAAGAGTCAAAACAACAGGAATTGTTGAAGTGCAGTTTGATCACAAGAGACTTCACTTCAAGCTAGTTGATGTAGGAGGCCAACGCTCAGAACGTAAAAAATGGATTCACTGTTTTGAGGATGTAACAGCGATTATCTACTGTGTAGCGCTCAGTGCATATGATTTAACTTTAGAGGAAGATGAAACTACTAATCGAATGGAAGAAAGCTTAAAGCTTTTTGAGTCCATCATCAATAACAAATGGTTTTTGGAAACATCAGTTATTTTATTTCTTAACAAGAAAGATTTGTTTGAAGAAAAAATTTCCAAGTTTTCTCTAACAATTTGCTTTGCTGATTATCCAGGGCCAAACACATTCGATGATGGTGCAAAATATATTAGAAAACAATTTGAATCAAAGAACTTAAACGATGAAAAAGAAATATACACTCACCTAACTTGTGCAACGGACACTCAAAACATCAATTTTGTATTTAATGCGGTGACGGACACAATAATAGCTACCAATCTAAAGGGGTGTGGACTTTACTAAATAAAACATGTTGAATGCTGCAATACAGTGGCCTACTCCCACACCGTGGTGGTCTTTGGCACGAGCAAAGTGAGCCCACACCACGGCGTTTGTACGACGACAGAAAAGCTGCCCACAAAAGTGGACCCCCTTGCCCTTACTGTGGCGAACAGATAACAACTTATGCTGAATTTATCAAATGAGCTGTGCAATGAAGTGTCTGATTGCTGACAACTTTATGATACTGTTATGAAATGGAACAATCATCTTGTCAAACTTCCTTCAACTGCTATCGAGAAGCCTCGCATTTTGAACACCATTCAAGCCGATGATGCTAATATTAACAACTTAATTTTTAAGCAATTTTTTAAACAATTCTTAAATAGTCCATTTTCATTGATCAATCAATATTATTATCCTGATGCCAATTGTACGCGCATTTCCCATATAATACCATTTCACTGTATATATTGCTTGACATTCCGTGTTTTTTAAACAAGCCAACCGCACCAAGGTGAAATGATACCCGCATTAAGCTCAAAGAAATCTGTCTTAAGAATTTTATTTTTTACAGCCAATTGTGGATTGGAGTCTCTCAAAATTAATTTAATATACGTGCATTTTCACTTTTATTCCAAAGCCAATACATCACTGCAGTACCATCCTCGGAGACCCAGGGCATCAGGGAATTTACCCCTCCCCTCCCCTCTCTCCCTTCCCCACCCCACCCCGACGCACTGGGTCTCCAAGGATGATGCAGTACTATCTAATTGATTGAATTGTATGAGGGGGGAGTGTTAATATTCATTAACATAAATATTCTAGAATATCTCAGCTGGATTTGATTACACTTTTCCAATTTATTATCATGTTACCCCCGTTTCTTTCTAACGTTTGCTGTGTCAATTCTTGCACCTTTGCCAAAAATAAGGAAAAAAGCTTAGGAAAATCTTAAAGTTGTGAAGCAGAAAAGTTGTACTTCATTTGATCTCCCTGTCACCCTTGGCTTTTCCTCGGGTAAAAGTTTCTGATGAAGCACCTCATAGAAGCAAAGGAAGGAATGGGGCGTTTTCATCTTTAAGATATATTGGAAAAGTTGAAATCAATGGAATTATTAACTTCATAAGCTTAACTCGATGTGCAATCAGCTCAAAATGCCGATGCTTCCAAATGATCTCCTACCTATCGAGCAAGAATTCACTTCATTGAATTACTAGTCTCATCGTCGATGATAGTATCGACAATACCAAAGAAGTGAAGCATTAGATCCCAGTGTCACACCAGACCCCTCTCGTTGTGCTTAAATGCGAGAGGCCTGGGTCATACTGGAGGGCAAATCTAACGTCACATCTAGACAACCTTAACGCAATCACAAAATCTGTTGACCATATTAAACACAATTGAGACTTGTTGTTTAGTGTATGGGCGAACAAGCATCTAGTATAGCTTCAAAGGCTCGTTTGTGAGCCAGCGTCAACCAATTATGTTACAAATCGGATTTGGCCGTTGTTATTCTAGATGTGACGCAAGGCCTTCTGCTTCAAATTGAGAGCAAACAAGAGTTGTTATGGCAAGTGATCTTAACAAGTAATGGCCTCACTCAGATGGGTTTTACTAATTAACATCTGGAGATGATGTTTTGCATGCGTGAGAGTTCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P08239	Guanine nucleotide-binding protein G(o) subunit alpha OS=Bos taurus OX=9913 GN=GNAO1 PE=1 SV=4
P09471	Guanine nucleotide-binding protein G(o) subunit alpha OS=Homo sapiens OX=9606 GN=GNAO1 PE=1 SV=4
P59216	Guanine nucleotide-binding protein G(o) subunit alpha OS=Cricetulus longicaudatus OX=10030 GN=GNAO1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000689 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00503 all species →	G-alpha	G-protein alpha subunit	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011025 all species →	Homologous_superfamily	G protein alpha subunit, helical insertion	Interproscan
IPR001019 all species →	Family	Guanine nucleotide binding protein (G-protein), alpha subunit	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001408 all species →	Family	G-protein alpha subunit, group I	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10218 all species →	GTP-BINDING PROTEIN ALPHA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0007165 all species →	Biological Process	signal transduction	Interproscan
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0019001 all species →	Molecular Function	guanyl nucleotide binding	Interproscan
GO:0031683 all species →	Molecular Function	G-protein beta/gamma-subunit complex binding	Interproscan
GO:0001664 all species →	Molecular Function	G protein-coupled receptor binding	Interproscan
GO:0005834 all species →	Cellular Component	heterotrimeric G-protein complex	Interproscan
GO:0007188 all species →	Biological Process	adenylate cyclase-modulating G protein-coupled receptor signaling pathway	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04630	GNAI; guanine nucleotide-binding protein G(i) subunit alpha	-	GTP-binding proteins	ko04031	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.