Detailed information of gene02325.t1 in Actinoscyphia liui

Genomic Location: chr1:35984660...35988235
NR annotation: XP_020915508.1, ribonuclease P protein subunit p40 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75818Ribonuclease P protein subunit p40 OS=Homo sapiens OX=9606 GN=RPP40 PE=1 SV=3
Q5BK64Ribonuclease P protein subunit p40 OS=Rattus norvegicus OX=10116 GN=Rpp40 PE=2 SV=2
Q8R1F9Ribonuclease P protein subunit p40 OS=Mus musculus OX=10090 GN=Rpp40 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008980 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF08584
all species →		Ribonuc_P_40Ribonuclease P 40kDa (Rpp40) subunitFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013893
all species →		FamilyRibonuclease P protein subunit Rpp40Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR15396
all species →		RIBONUCLEASE P PROTEIN SUBUNIT P40Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000171
all species →		Molecular Functionribonuclease MRP activityInterproscan
GO:0000172
all species →		Cellular Componentribonuclease MRP complexInterproscan
GO:0000447
all species →		Biological Processendonucleolytic cleavage in ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0001682
all species →		Biological ProcesstRNA 5'-leader removalInterproscan
GO:0004526
all species →		Molecular Functionribonuclease P activityInterproscan
GO:0030677
all species →		Cellular Componentribonuclease P complexInterproscan
GO:0030681
all species →		Cellular Componentmultimeric ribonuclease P complexInterproscan
GO:1905267
all species →		Biological Processobsolete endonucleolytic cleavage involved in tRNA processingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14530RPP40; ribonucleases P/MRP protein subunit RPP40EC:3.1.26.5
Mitochondrial biogenesisko03029deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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