Detailed information of gene02422.t1 in Actinoscyphia liui

Genomic Location: chr1:36958868...36964751
NR annotation: XP_020915533.1, transmembrane prolyl 4-hydroxylase isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8BG58Transmembrane prolyl 4-hydroxylase OS=Mus musculus OX=10090 GN=P4htm PE=1 SV=1
Q9NXG6Transmembrane prolyl 4-hydroxylase OS=Homo sapiens OX=9606 GN=P4HTM PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000200 (this species only)

 Pfam domain
No Pfam domain signature was detected for gene02422.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR045054
all species →		FamilyProlyl 4-hydroxylaseInterproscan
IPR005123
all species →		DomainOxoglutarate/iron-dependent dioxygenaseInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR006620
all species →		DomainProlyl 4-hydroxylase, alpha subunitInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10869
all species →		PROLYL 4-HYDROXYLASE ALPHA SUBUNITInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004656
all species →		Molecular Functionprocollagen-proline 4-dioxygenase activityInterproscan
GO:0005783
all species →		Cellular Componentendoplasmic reticulumInterproscan
GO:0018401
all species →		Biological Processpeptidyl-proline hydroxylation to 4-hydroxy-L-prolineInterproscan
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005506
all species →		Molecular Functioniron ion bindingInterproscan
GO:0016705
all species →		Molecular Functionoxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygenInterproscan
GO:0031418
all species →		Molecular FunctionL-ascorbic acid bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene02422.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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