Detailed information of gene02466.t2 in Actinoscyphia liui

Genomic Location: chr1:37511120...37520916
NR annotation: XP_020892917.1, geranylgeranyl transferase type-2 subunit alpha isoform X1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q5EA80Geranylgeranyl transferase type-2 subunit alpha OS=Bos taurus OX=9913 GN=RABGGTA PE=2 SV=1
A5A779Geranylgeranyl transferase type-2 subunit alpha OS=Sus scrofa OX=9823 GN=RABGGTA PE=2 SV=1
Q9JHK4Geranylgeranyl transferase type-2 subunit alpha OS=Mus musculus OX=10090 GN=Rabggta PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14580LRR_9Leucine-rich repeatRepeatInterproscan
PF01239PPTAProtein prenyltransferase alpha subunit repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611RepeatLeucine-rich repeatInterproscan
IPR002088RepeatProtein prenyltransferase, alpha subunitInterproscan
IPR032675Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11129PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNITInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0008318Molecular Functionprotein prenyltransferase activityInterproscan
GO:0018342Biological Processprotein prenylationInterproscan
GO:0004663Molecular FunctionRab geranylgeranyltransferase activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005968Cellular ComponentRab-protein geranylgeranyltransferase complexInterproscan
GO:0018344Biological Processprotein geranylgeranylationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K14050RABGGTA; geranylgeranyl transferase type-2 subunit alphaEC:2.5.1.60
Membrane traffickingko04131deepkoala

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