Detailed information of gene02692.t2 in Actinoscyphia liui

Genomic Location: chr1:40727110...40744112
NR annotation: XP_028519565.1, uncharacterized protein LOC110254253 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00567TUDORTudor domainDomainInterproscan
PF12872OST-HTHOST-HTH/LOTUS domainDomainInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR035437Homologous_superfamilySNase-like, OB-fold superfamilyInterproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR002999DomainTudor domainInterproscan
IPR025605DomainOST-HTH/LOTUS domainInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR039091FamilyAryl hydrocarbon receptor/Aryl hydrocarbon receptor repressorInterproscan
IPR041966Homologous_superfamilyLOTUS-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10649ARYL HYDROCARBON RECEPTORInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0004879Molecular Functionnuclear receptor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0006805Biological Processxenobiotic metabolic processInterproscan
GO:0009410Biological Processresponse to xenobiotic stimulusInterproscan
GO:0034751Cellular Componentaryl hydrocarbon receptor complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K18405TDRD1_4_6_7; tudor domain-containing protein 1/4/6/7-Chromosome and associated proteinsko03036deepkoala

TOP