Gene detail

Detailed information of gene02987.t1 in Actinoscyphia liui

Genomic Location: chr1:45151024...45155695
NR annotation: KXJ25981.1, Protein prenyltransferase alpha subunit repeat-containing protein 1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A3KPW7	Protein prenyltransferase alpha subunit repeat-containing protein 1 OS=Danio rerio OX=7955 GN=ptar1 PE=2 SV=1
Q7Z6K3	Protein prenyltransferase alpha subunit repeat-containing protein 1 OS=Homo sapiens OX=9606 GN=PTAR1 PE=1 SV=2
A1L3L1	Protein prenyltransferase alpha subunit repeat-containing protein 1-B (Fragment) OS=Xenopus laevis OX=8355 GN=ptar1-b PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009265 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01239 all species →	PPTA	Protein prenyltransferase alpha subunit repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002088 all species →	Repeat	Protein prenyltransferase, alpha subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11129 all species →	PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008318 all species →	Molecular Function	protein prenyltransferase activity	Interproscan
GO:0018342 all species →	Biological Process	protein prenylation	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K14137	PTAR1; protein prenyltransferase alpha subunit repeat containing protein 1	-	Prenyltransferases	ko01006	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.