Gene detail

Detailed information of gene03053.t1 in Actinoscyphia liui

Genomic Location: chr1:45993958...46006833
NR annotation: XP_028518369.1, dual specificity mitogen-activated protein kinase kinase 2-like [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene03053.t1

CGTTTGTTTTACCAATACCTGGAGCACTTCAACGCAAGTGTTCATATGCAAAGACTGTAAGACGTTTGCAGACTGCATCTTTTACAAGAAACAATGATGCTTCGATTAGGGTTGTTCCTACTCCACTAGTGTTACAATTATCAGTTGATGTATTTGCAATGAAGAAGAATAGACCGAATTTAACTATTGCTTGTCAAGCATCGGCAGTCCCACCACCTCCACAGCCGAACGAAGAAAATTCCATCGATTTGCACAGAGACGAGGACGTCAGCAAGAAACTAAATGGACTCGACCTCGATAACTTACAACGCAAGAGACTCGAGGAATTTCTGAATGAGAAGAGAAAAATAGGGGAGCTCATTGCTGACGATTTTGAGAAAATTAATGATTTGGGTGCAGGGAATGGCGGTGTGGTTACTAAGGTTCTGCACAAACCGAGCGGTCTTATCATGGCAAGAAAGTTGATTCACCTGGAAATCAAACCAGCAATTCGAAATCAAATCATCAGAGAGTTAAAGGTTTTGCACGACTGCAATTCTCCGTACATTGTAGGATTTTATGGTGCTTTTTACAGCGATGGAGAAATTTCGATTTGTATGGAGCACATGGATGGTGGCTCGTTAGATCAAATTTTGAAAAGAGCAGGCAGAATTGAGGAGGACATTTTGGGTAAAATCAGTATTGCTGTTTTGAAAGGTCTAAGTTATTTGCGTGAAAGCCATTCGATAATTCACAGAGACGTCAAACCATCAAACATTCTTGTAAACACACGAGGAGAAATCAAGTTGTGTGATTTTGGTGTTAGTGGTCAACTTATTGATTCCATGGCTAATTCATTTGTCGGCACTAGGTCTTATATGTCGCCTGAACGATTACAAGGATCTCAATATACTGTGCAGTCTGATATCTGGAGCTTTGGGCTTTCCCTTGTTGAAATGGTAATAGGAAAATATCCTATTCCTCCTCCTGATGAAAAAGAAGTCGTAAAGATAATCAGTATGGATCCACGTAGTTTAGCATCATTCAACATGTCCACTTTACAGCTACCTCCTGGGGTGCGCCCGCCAAGTGGTTATAATGATGGGGTTACTGTCAAACCAATGGCAATATTTGAGTTACTGGATTACATTGTCAATGAGGCTCCTCCAAAACTTCCAGAGTCTTGTTTTTCTAAAGAATTTTGTGAATTTGTTAACAAATGCCTTGTGAAGAATCCCTCAGAAAGAGCAGACCTCAAGTATCTAATGAAACACCCTTTTATCAAGAAAGCTGAAGAGCAGACTGTTGACTTTGCAAGCTATGTTTCAACATTCCAGCTTTCTGCTAATGCTCAGTAATCAGAATACAATACTAGTCATTTGATAAATATTTCTCAGATTTAATTTACTAACCTCTTCTTCTGAGAGATAACTTTTTGTCATAGGATTTAACATTCTTTATAATGTATTATATTGTTACATGGACATGGAATGTTAGGGGTATGACAGGTTAACATGACGTATGCACTTAATATTATTTGTCCTGTATTGCTGGGATGCAAGTGATCCCTTGAGAATCAAAAGACAACTTAGACATGGCAGCCATATTGGAGGACAAAACAATAGACACTAATGAGAAATCTTATGTTAAGTTCAACCAAGATGGCTACCGTGACATCAGTTGCACCCCAGCAATTGTAGAGAATTAAATTACATGATGTGCAGGATGGATTCTCAATAAGTGCCGGAAACCTGCTAAAAAATGGCTACTTGAAAATTTGAGCAGCCTACTTTCAGTGAAAAGCACTACATCTTTAATAAACCTTTATAAACTAAGCCACCTTTAGATCCTAGCCATATACTTTAAAACTTGACGAGAACCACCATGTACAACTCTGCCTTATTTCCACTGATCCATGTGGTCTTTGGTTTATGATTTAATTTTCTATAATGTGGGATAAATCAGGTGTCCAATGAATAATCTTATATCATGGAATATCCCACTGGTAACCCTACATACATACTAGTTATACAATGCTTTCGAGTTGTATACCGCGGAATATCCCACGCGTCACTTGTATTTTCTAAGTATACACACGAACCTTTAGGTGAGTTTGTATACAGAGAAAATACAAGTGACAAGTGGGACGTGCCATGGTATACAATGAGAAGGCATTGTATAACTATTTTATCCCACAACATAGAAAATACCTACAACTGCAGCACCTGACGGGTAGGAAGAGTGGAATACCACCAAATATTCAATGGCAATTCTGCTCTCTGATTGGCTGTATTTTCTATGGTGTGGCATAAAGGCTGGTAGTCATGTGTGGAGAACTGATCCACTGATACAGTATTGCTGGGGTGCAACCGACATCACGACAGCCACCTTGGTTGAACTTGAATAAAAAATTTCTCATTAGCATCCATTGTTTGTTCATCCAACATGGCCACCATGGTTTGCTTGCACCCCAGCAATAGATTATTAGGGGACAGGGGTGTAACTAGGAGGGTTCCAGGCACTCTGAACCCCCCTCCCCCTTTTTGGCTTGGCCCCAGTTTTTCCTTGTATTTATTTAAAAAAACATGACAATGACAACCCCCCACTGGATGTTAACCATACAGATTAAGACCTAGAACCCCCCTTACCAGACAGGCTGGCTACGCCCCACTGGATGTTAACCATACAGATTAAGACCTAGAACCCCCCTTACCAGACAGGCTGGCTACGCCCCACTGGATGTTAACCATACAGATTAAGACCTAGAACCCCCCTTACCAGACAGGCTGGCTACGCCCCACTGGATGTTAACCATACAGATTAAGACCTAGAACCCCCCTTACCAGACAGGCTGGTTACGCCCCTGGGGGTTGCAACACATTGGTTTGTGCATGTTTTTATAACCTAGTATTAAATATTATGTGAGTTATTAATAAGCATTAGAGGTATGGTTGTAAATAGAACACATTGCCTCTATTATTATAAATGCTGTAAGAACTGCATGATTGGCTACTGGGTAATATTTGTGTCAAGTATATTTGGTGATTGTTGCAAGTCAGGCATTGTGTAGAAGCTATAAAAGTTTGAACAAGGCCATTGACTATTTTGATGTACATTTCCTGTGTCGATATGCAGTAATGACTTTGTTGTAGGGCTTGGTAGTAATTATTGTATACATAGCAATTCTAATAAACTGGTAGAGTATCTCTTA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q90891	Dual specificity mitogen-activated protein kinase kinase 2 OS=Gallus gallus OX=9031 GN=MAP2K2 PE=2 SV=1
P36506	Dual specificity mitogen-activated protein kinase kinase 2 OS=Rattus norvegicus OX=10116 GN=Map2k2 PE=1 SV=1
Q05116	Dual specificity mitogen-activated protein kinase kinase 1 OS=Xenopus laevis OX=8355 GN=map2k1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001663 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00069 all species →	Pkinase	Protein kinase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008271 all species →	Active_site	Serine/threonine-protein kinase, active site	Interproscan
IPR011009 all species →	Homologous_superfamily	Protein kinase-like domain superfamily	Interproscan
IPR000719 all species →	Domain	Protein kinase domain	Interproscan
IPR050915 all species →	Family	MAP kinase kinase	Interproscan
IPR017441 all species →	Binding_site	Protein kinase, ATP binding site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47448 all species →	DUAL SPECIFICITY MITOGEN-ACTIVATED PROTEIN KINASE KINASE DSOR1-LIKE PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004672 all species →	Molecular Function	protein kinase activity	Interproscan
GO:0006468 all species →	Biological Process	protein phosphorylation	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene03053.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.