Detailed information of gene03075.t1 in Actinoscyphia liui

Genomic Location: chr1:46272887...46276109
NR annotation: XP_031554400.1, F-box only protein 42-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006390 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13415
all species →
Kelch_3Galactose oxidase, central domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015915
all species →
Homologous_superfamilyKelch-type beta propellerInterproscan
IPR052821
all species →
FamilyF-box only substrate-recognition componentInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46432
all species →
F-BOX ONLY PROTEIN 42Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0019005
all species →
Cellular ComponentSCF ubiquitin ligase complexInterproscan
GO:1990756
all species →
Molecular Functionubiquitin-like ligase-substrate adaptor activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene03075.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP