Detailed information of gene03219.t1 in Actinoscyphia liui

Genomic Location: chr1:49067017...49076883
NR annotation: XP_020916870.1, vacuolar protein sorting-associated protein 33B [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q2HJ18Vacuolar protein sorting-associated protein 33B OS=Bos taurus OX=9913 GN=VPS33B PE=2 SV=1
Q58EN8Vacuolar protein sorting-associated protein 33B OS=Danio rerio OX=7955 GN=vps33b PE=2 SV=1
P59016Vacuolar protein sorting-associated protein 33B OS=Mus musculus OX=10090 GN=Vps33b PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001568 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00995
all species →
Sec1Sec1 familyFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027482
all species →
Homologous_superfamilySec1-like, domain 2Interproscan
IPR001619
all species →
FamilySec1-like proteinInterproscan
IPR036045
all species →
Homologous_superfamilySec1-like superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11679
all species →
VESICLE PROTEIN SORTING-ASSOCIATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016192
all species →
Biological Processvesicle-mediated transportInterproscan
GO:0005764
all species →
Cellular ComponentlysosomeInterproscan
GO:0005773
all species →
Cellular ComponentvacuoleInterproscan
GO:0006886
all species →
Biological Processintracellular protein transportInterproscan
GO:0033263
all species →
Cellular ComponentCORVET complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene03219.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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