Detailed information of gene03341.t1 in Actinoscyphia liui

Genomic Location: chr1:51623886...51633513
NR annotation: XP_020904810.1, ubiquitin carboxyl-terminal hydrolase 3 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91W36Ubiquitin carboxyl-terminal hydrolase 3 OS=Mus musculus OX=10090 GN=Usp3 PE=2 SV=1
Q9Y6I4Ubiquitin carboxyl-terminal hydrolase 3 OS=Homo sapiens OX=9606 GN=USP3 PE=1 SV=2
Q5XGZ2Ubiquitin carboxyl-terminal hydrolase 44-B OS=Xenopus laevis OX=8355 GN=usp44-b PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0006430 (this species only)
Ubiquitin familyUBD|ZnF|ZnF_UBP · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00443
all species →		UCHUbiquitin carboxyl-terminal hydrolaseFamilyInterproscan
PF02148
all species →		zf-UBPZn-finger in ubiquitin-hydrolases and other proteinDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR038765
all species →		Homologous_superfamilyPapain-like cysteine peptidase superfamilyInterproscan
IPR001607
all species →		DomainZinc finger, UBP-typeInterproscan
IPR018200
all species →		Conserved_siteUbiquitin specific protease, conserved siteInterproscan
IPR001394
all species →		DomainPeptidase C19, ubiquitin carboxyl-terminal hydrolaseInterproscan
IPR028889
all species →		DomainUbiquitin specific protease domainInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR050185
all species →		FamilyUbiquitin carboxyl-terminal hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21646
all species →		UBIQUITIN CARBOXYL-TERMINAL HYDROLASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan
GO:0004843
all species →		Molecular Functioncysteine-type deubiquitinase activityInterproscan
GO:0016579
all species →		Biological Processprotein deubiquitinationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K11986USP3; ubiquitin carboxyl-terminal hydrolase 3EC:3.4.19.12
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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