Gene detail

Detailed information of gene03545.t1 in Actinoscyphia liui

Genomic Location: chr1:55769011...55791664
NR annotation: XP_031559699.1, uncharacterized protein LOC116295881 isoform X1 [Actinia tenebrosa]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P55664	Putative threonine dehydratase OS=Sinorhizobium fredii (strain NBRC 101917 / NGR234) OX=394 GN=NGR_a01490 PE=3 SV=1
Q99U50	L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain Mu50 / ATCC 700699) OX=158878 GN=tdcB PE=3 SV=1
Q7A5L8	L-threonine dehydratase catabolic TdcB OS=Staphylococcus aureus (strain N315) OX=158879 GN=tdcB PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036052	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR050147	Family	Serine/Threonine Dehydratase	Interproscan
IPR001926	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48078	THREONINE DEHYDRATASE, MITOCHONDRIAL-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003941	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0004794	Molecular Function	threonine deaminase activity	Interproscan
GO:0006565	Biological Process	L-serine catabolic process	Interproscan
GO:0006567	Biological Process	threonine catabolic process	Interproscan
GO:0009097	Biological Process	isoleucine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01754	E4.3.1.19, ilvA, tdcB; threonine dehydratase	EC:4.3.1.19	Valine, leucine and isoleucine biosynthesis	ko00290	deepkoala