Genomic Location: chr1:57828886...57836080
NR annotation: XP_020916158.1, paired box protein Pax-3 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families
| CDS |
| gene03627.t2 |
| Transcript |
| gene03627.t2 |
| Protein |
| gene03627.t2 |
| UniProt accession | Description |
|---|---|
| P23760 | Paired box protein Pax-3 OS=Homo sapiens OX=9606 GN=PAX3 PE=1 SV=2 |
| P24610 | Paired box protein Pax-3 OS=Mus musculus OX=10090 GN=Pax3 PE=1 SV=2 |
| Q28DP6 | Paired box protein Pax-3 OS=Xenopus tropicalis OX=8364 GN=pax3 PE=2 SV=2 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000410 (this species only) |
| Transcription factor family | Homeobox · all TF in this species |
| Transcription factor family | PAX · all TF in this species |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF00046 all species → | Homeodomain | Homeodomain | Domain | Interproscan |
| PF00292 all species → | PAX | 'Paired box' domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001356 all species → | Domain | Homeobox domain | Interproscan |
| IPR001523 all species → | Domain | Paired domain | Interproscan |
| IPR009057 all species → | Homologous_superfamily | Homeobox-like domain superfamily | Interproscan |
| IPR036388 all species → | Homologous_superfamily | Winged helix-like DNA-binding domain superfamily | Interproscan |
| IPR017970 all species → | Conserved_site | Homeobox, conserved site | Interproscan |
| IPR043565 all species → | Family | PAX family | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR45636 all species → | PAIRED BOX PROTEIN PAX-6-RELATED-RELATED | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0003677 all species → | Molecular Function | DNA binding | Interproscan |
| GO:0006355 all species → | Biological Process | regulation of DNA-templated transcription | Interproscan |
| GO:0000981 all species → | Molecular Function | DNA-binding transcription factor activity, RNA polymerase II-specific | Interproscan |
| GO:0000978 all species → | Molecular Function | RNA polymerase II cis-regulatory region sequence-specific DNA binding | Interproscan |
| GO:0006357 all species → | Biological Process | regulation of transcription by RNA polymerase II | Interproscan |
| GO:0048856 all species → | Biological Process | anatomical structure development | Interproscan |
gene03627.t2.
