Detailed information of gene04306.t1 in Actinoscyphia liui

Genomic Location: chr2:2967755...2970552
NR annotation: PAA79097.1, hypothetical protein BOX15_Mlig009439g7 [Macrostomum lignano]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P04323Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
P20825Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
Q7LHG5Transposon Ty3-I Gag-Pol polyprotein OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) OX=559292 GN=TY3B-I PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14893PNMAPNMAFamilyInterproscan
PF13975gag-asp_proteasgag-polyprotein putative aspartyl proteaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR053134FamilyRNA-directed DNA polymerase homologInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR048270DomainParaneoplastic antigen Ma-like, C-terminal domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24559TRANSPOSON TY3-I GAG-POL POLYPROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan

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