Detailed information of gene04428.t1 in Actinoscyphia liui

Genomic Location: chr2:5156413...5162827
NR annotation: XP_041358190.1, NF-X1-type zinc finger protein NFXL1-like [Gigantopelta aegis]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A0JMY5NF-X1-type zinc finger protein NFXL1 OS=Xenopus laevis OX=8355 GN=nfxl1 PE=2 SV=1
Q6ZNB6NF-X1-type zinc finger protein NFXL1 OS=Homo sapiens OX=9606 GN=NFXL1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001383 (this species only)
Transcription factor familyzf-NF-X1 · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01422
all species →
zf-NF-X1NF-X1 type zinc fingerFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000967
all species →
DomainZinc finger, NF-X1-typeInterproscan
IPR034078
all species →
FamilyTranscription factor NFX1 familyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12360
all species →
NUCLEAR TRANSCRIPTION FACTOR, X-BOX BINDING 1 NFX1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0000977
all species →
Molecular FunctionRNA polymerase II transcription regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →
Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0003700
all species →
Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene04428.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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