Genomic Location: chr2:5647335...5655201
NR annotation: KXJ16458.1, Transposon Ty3-G Gag-Pol polyprotein [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families
| CDS |
| gene04459.t2 |
| Transcript |
| gene04459.t2 |
| Protein |
| gene04459.t2 |
| UniProt accession | Description |
|---|---|
| P04323 | Retrovirus-related Pol polyprotein from transposon 17.6 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 |
| P20825 | Retrovirus-related Pol polyprotein from transposon 297 OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1 |
| P10394 | Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1 |
| Family type | Membership / link |
|---|---|
| Orthogroup (gene family) | OG0000010 (this species only) |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF17917 all species → | RT_RNaseH | RNase H-like domain found in reverse transcriptase | Domain | Interproscan |
| PF13975 all species → | gag-asp_proteas | gag-polyprotein putative aspartyl protease | Domain | Interproscan |
| PF19259 all species → | Ty3_capsid | Ty3 transposon capsid-like protein | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR043128 all species → | Homologous_superfamily | Reverse transcriptase/Diguanylate cyclase domain | Interproscan |
| IPR021109 all species → | Homologous_superfamily | Aspartic peptidase domain superfamily | Interproscan |
| IPR041373 all species → | Domain | Reverse transcriptase, RNase H-like domain | Interproscan |
| IPR036157 all species → | Homologous_superfamily | dUTPase-like superfamily | Interproscan |
| IPR001995 all species → | Domain | Peptidase A2A, retrovirus, catalytic | Interproscan |
| IPR045358 all species → | Domain | Ty3 transposon capsid-like protein | Interproscan |
| IPR051320 all species → | Family | Viral Replication and Maturation Polyprotein | Interproscan |
| IPR043502 all species → | Homologous_superfamily | DNA/RNA polymerase superfamily | Interproscan |
| IPR001969 all species → | Active_site | Aspartic peptidase, active site | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR33064 all species → | POL PROTEIN | Interproscan |
| GO term | Category | Description | Source |
|---|---|---|---|
| GO:0004190 all species → | Molecular Function | aspartic-type endopeptidase activity | Interproscan |
| GO:0006508 all species → | Biological Process | proteolysis | Interproscan |
gene04459.t2.
