Detailed information of gene04548.t1 in Actinoscyphia liui

Genomic Location: chr2:7372092...7385964
NR annotation: XP_050641569.1, calmodulin-1-like [Macaca thibetana thibetana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P62146Calmodulin-alpha (Fragment) OS=Arbacia punctulata OX=7641 PE=1 SV=2
P62147Calmodulin-1 OS=Branchiostoma floridae OX=7739 PE=2 SV=2
P62148Calmodulin-1 OS=Branchiostoma lanceolatum OX=7740 PE=2 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000122 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13499
all species →		EF-hand_7EF-hand domain pairDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR002048
all species →		DomainEF-hand domainInterproscan
IPR050230
all species →		FamilyCalcium-Regulated Muscle Contraction and Cellular ProcessInterproscan
IPR011992
all species →		Homologous_superfamilyEF-hand domain pairInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23048
all species →		MYOSIN LIGHT CHAIN 1, 3Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0016460
all species →		Cellular Componentmyosin II complexInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K02183CALM; calmodulin-Exosomeko04147deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP