Detailed information of gene04823.t1 in Actinoscyphia liui

Genomic Location: chr2:11767126...11776362
NR annotation: KXJ08430.1, ATP-dependent DNA helicase PIF1 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6MHJ5ATP-dependent DNA helicase Pif1 OS=Bdellovibrio bacteriovorus (strain ATCC 15356 / DSM 50701 / NCIMB 9529 / HD100) OX=264462 GN=pif1 PE=1 SV=1
Q38CE9ATP-dependent DNA helicase PIF6 OS=Trypanosoma brucei brucei (strain 927/4 GUTat10.1) OX=185431 GN=PIF6 PE=3 SV=1
A5WFR0ATP-dependent DNA helicase Pif1 OS=Psychrobacter sp. (strain PRwf-1) OX=349106 GN=pif1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000321 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05970
all species →
PIF1PIF1-like helicaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →
Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR051055
all species →
FamilyPIF1 DNA helicaseInterproscan
IPR003593
all species →
DomainAAA+ ATPase domainInterproscan
IPR010285
all species →
FamilyDNA helicase Pif1-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47642
all species →
ATP-DEPENDENT DNA HELICASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016887
all species →
Molecular FunctionATP hydrolysis activityInterproscan
GO:0000723
all species →
Biological Processtelomere maintenanceInterproscan
GO:0003678
all species →
Molecular FunctionDNA helicase activityInterproscan
GO:0006281
all species →
Biological ProcessDNA repairInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene04823.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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