Detailed information of gene05000.t1 in Actinoscyphia liui

Genomic Location: chr2:15102439...15133198
NR annotation: XP_020910180.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A0A1D5NSM8Sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1 OS=Danio rerio OX=7955 GN=svep1 PE=1 SV=1
Q80T79CUB and sushi domain-containing protein 3 OS=Mus musculus OX=10090 GN=Csmd3 PE=1 SV=3
Q7Z407CUB and sushi domain-containing protein 3 OS=Homo sapiens OX=9606 GN=CSMD3 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02494HYRHYR domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF12662cEGFComplement Clr-like EGF-likeDomainInterproscan
PF00354PentaxinPentaxin familyDomainInterproscan
PF00431CUBCUB domainDomainInterproscan
PF00092VWAvon Willebrand factor type A domainDomainInterproscan
PF00084SushiSushi repeat (SCR repeat)DomainInterproscan
PF07699Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036465Homologous_superfamilyvon Willebrand factor A-like domain superfamilyInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR003410DomainHYR domainInterproscan
IPR035976Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR035914Homologous_superfamilySpermadhesin, CUB domain superfamilyInterproscan
IPR051277FamilySEZ6/CSMD/C4BPB Neuronal & Immune RegulatorsInterproscan
IPR000859DomainCUB domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000436DomainSushi/SCR/CCP domainInterproscan
IPR013320Homologous_superfamilyConcanavalin A-like lectin/glucanase domain superfamilyInterproscan
IPR026823DomainComplement Clr-like EGF domainInterproscan
IPR002035Domainvon Willebrand factor, type AInterproscan
IPR001759FamilyPentraxin-relatedInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR011641DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45656PROTEIN CBR-CLEC-78Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan

TOP