Gene detail

Detailed information of gene05243.t1 in Actinoscyphia liui

Genomic Location: chr2:19492469...19508576
NR annotation: XP_020909829.1, dihydrolipoyl dehydrogenase, mitochondrial [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene05243.t1

AGAAGTTTGGATTCTGGAAGGATTTTTTCATCCTTAGAGCTTCAAAATGAACAGTTTGATACATAGAAGTGTTAGAGTACATACTGTACTACGAGAGAGTCTAAAATTATGTAGAACACGAATTCTTCCTTCTTCTGGCCTGCTGTCGTCTAGACATTATTCAAGTGACGGGGGTGATGTTGACCTTGTGGTGATAGGTTCTGGACCAGGGGGATACGTTGCAGCGATAAAAGCTGCACAGTTAGGCATGAAGACAGTATGTGTAGAGAAGAACCCAACTCTTGGTGGAACTTGCTTAAATGTTGGATGCATCCCATCAAAGGCCCTTCTGAACAACTCTTACCTTTACCATCAAGCATCTTCAAATGACTTTAAAAACAGAGGAATCGATGTGTCTGGAATCTCACTGAATCTCAATCAAATGATGTCACAAAAAGACACAGCAGTCAAAACTCTTACAAATGGAATTGCTCACCTTTTAAAACAAAACAAGGTTACTCATGCACAAGGAAGAGGCACAATCACTGGACCTAATGAGGTTACAGTTCACAAAGATGACAGCTCTCAAGAAGTCATTTCCACTAAAAACATCCTGATAGCAACAGGATCTGAAGTTACTCCATTCCCTGGTATTGAGATTGACGAGAAGCATATCATTTCATCAACCGGTGCTTTGTCTCTTGAAGCTGTGCCTAAAAAACTTATATTGATTGGTGCTGGAGTGATAGGTGTAGAACTGGGGTCAGTGTGGTCTAGACTAGGATCTAATGTGACTGCTGTAGAGTTCTTAGGACATGTTGGTGGTATTGGAATCGATATGGAAGTTTCAAAGAACTTCCAGAGAATTCTCAAAAAACAAGGAATGAAATTCAAACTAAATACAAAAGTTACAGGAGCAAGAAGGACAGAGAATGGAGTTGTTGTAAGTGTTGAATCAGCGAAAGATGGTTCAAAGAAAGAAGAGTTGGAATGTGATGTTCTTCTAGTATGTATTGGAAGAAGACCTTATACCACACGACTTGGATTAGAGAATGTTGGTATTCCCCTGGACTCCAGAGGTTGTGTGACAGTCAATGAAAGATTCCAAACTATTGTCCCTAGTATCCATGCAATTGGTGACTGTATAGAAGGCCCTATGCTAGCACACAAGGCTGAGGATGAAGGTATAATATGTGTAGAGGGAATGAATGGCGGTGCAGTACACATTGATTATGACTGTGTTCCCAGCGTTATCTATACCCATCCTGAAGTAGCATGGGTTGGAAAATCAGAAGAAATGCTGAAAGAAGAGGGTGTGGCATACAAGGTTGGAACGTTCCCTCTGTCAGCAAACAGTCGATCTAGAACCAATGCAGACATTGATGGTTTAATAAAAGTAGTAGCTGACAAGGACACTGACAGGTTATTGGGTGTACATATGGTTGCACCCACCGCTGGTGAGATGATCAATGAGGCTGCCTTAGCCTTGGAATATGGTGCTTCTTGTGAAGATATTGCAAGGGTCTGCCATGCACATCCTACTGTTTCAGAAGCATTCCGGGAAGCCAATATTTTAGCCTATACAGGAAAGGCAATCAACTTTTAGATCTGAATTAATATCGTTATTCATTGGCCATGTTGTACCCCAGTCACCACAGGGAGCCCACCCTTGATAAGATTACACTTTTGCATAAAACATCGGACTTATTTGAGGTCGCACTTGTTAAAGTGTTGTAAGTGAATTTGCACAAAGAAACCCTTATGTAGACATTCACTTGAGTAAATATTGCTCAAGTTGAAATTCTTTTTGAATTATTTATCTTTTTATAGAAGAAAAAGGTTTCAAAAGTAAAGGTTGCTTTCTGCAATTTAAGTAACCTGATTGATTGGGATCCCTGTGTCTAGAGGGTTGATTCAAGACATGATATGGAATTTGTTTTTACCTACAAAACTAGATTCTTCTATGTGTACAGAAACTATATGTTTATAAATACCCAAGTAAAACAAGAGTTCAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
F1N206	Dihydrolipoyl dehydrogenase, mitochondrial OS=Bos taurus OX=9913 GN=DLD PE=1 SV=2
P09622	Dihydrolipoyl dehydrogenase, mitochondrial OS=Homo sapiens OX=9606 GN=DLD PE=1 SV=2
Q60HG3	Dihydrolipoyl dehydrogenase, mitochondrial OS=Macaca fascicularis OX=9541 GN=DLD PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002934 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07992 all species →	Pyr_redox_2	Pyridine nucleotide-disulphide oxidoreductase	Domain	Interproscan
PF02852 all species →	Pyr_redox_dim	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR016156 all species →	Homologous_superfamily	FAD/NAD-linked reductase, dimerisation domain superfamily	Interproscan
IPR036188 all species →	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR023753 all species →	Domain	FAD/NAD(P)-binding domain	Interproscan
IPR001100 all species →	Family	Pyridine nucleotide-disulphide oxidoreductase, class I	Interproscan
IPR050151 all species →	Family	Class-I pyridine nucleotide-disulfide oxidoreductase	Interproscan
IPR012999 all species →	Active_site	Pyridine nucleotide-disulphide oxidoreductase, class I, active site	Interproscan
IPR004099 all species →	Domain	Pyridine nucleotide-disulphide oxidoreductase, dimerisation domain	Interproscan
IPR006258 all species →	Family	Dihydrolipoamide dehydrogenase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22912 all species →	DISULFIDE OXIDOREDUCTASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016491 all species →	Molecular Function	oxidoreductase activity	Interproscan
GO:0050660 all species →	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0004148 all species →	Molecular Function	dihydrolipoyl dehydrogenase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0045252 all species →	Cellular Component	oxoglutarate dehydrogenase complex	Interproscan
GO:0016668 all species →	Molecular Function	oxidoreductase activity, acting on a sulfur group of donors, NAD(P) as acceptor	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00382	DLD, lpd, pdhD; dihydrolipoyl dehydrogenase	EC:1.8.1.4	Exosome	ko04147	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.