Gene detail

Detailed information of gene05264.t2 in Actinoscyphia liui

Genomic Location: chr2:19799848...19802608
NR annotation: XP_031554543.1, beta-alanine-activating enzyme-like isoform X1 [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene05264.t2

ATGCGAGCAACTGGAGATCTCGGTTACGCCCACAATGGCCAGGTATGGTACCATGGACGAGAGAACAGACAGATTAAAAAAATGGGAAAAAGAATAACCCTGGACTGGATAGAACAGGTTATTTCCAGAACCATTCCAGACCATGCTTATTTCACTGCATCAGAAACCAATCCAGAGAAACTACAAAACAGCATAATTTACTTATTTGTCAAACCAACATTTCCTTGCAATCAAAGCCAGCTTGTAGCATCAATAAAGAAGGCATTGGAAGACTTATTGCCACCCCATGCTCGCCCTGATTACATCTATGTTGTTGATACTATCCCAATGACATCTCATGGCAAAGTAGATTCCAGAGAACTGCTCAGAGGTTGTAAGAAAGAGGCTCTTGACTTGAATGTTTCTGTACATGATTTCCTAGTGAAGACATGGTCGGCAAGTATACGCAATAAGGCTGTAATTCAACTGTCAAGTTCCAACAAATTGGCTACCAAACACAATGAAACTATAACCGAATTTGTAGAAAAATCTCAAAATGAAGCTAGTAGCAAGGAACACCAACGTTTTGGTGTGGAAAATAAGGATAGCTTTGTAGAAAGTGGAGGAACATCGATTGATGCTGTCAGGATGGTCAGTGAGATTGAATCATGGCTGGATAGCAAATTGGGATCACCAGTTGATATATCGGAACTTCTCGATATCGTTTTGAACGAAACTTTTGCAGATTTGTGTCGATACGTTGATATGGTCTCTGCAGCAGTTAGAGCATCTTGGGATGTCAGTGTGAACGGCGCCAAGTCAAGTTCTAAATCCGAGATAGGCCATCATTTCAACGACAATTCTCGCCTTTCCCCCGACTTGTCGCCGAAACATGTACATTTTGAAAACTCTTCAGTATCAGCAACTTTAAAAAATGGTGGTACTAATGAAGAACTTTACAGCAGTCAAAAAACAGCAACTTCACTACCTTCAGCTAAGCGAATGAAAAAAGACCAGTACAATTACCCATGTGGGACAGAAAATTGTTTCTGTTCTATTCAACGGGGCATGCGTACAACAACATGTACATTATGTACAGACCTGTGCCATCGTGAAACTAAACAGGATTTGAAAACTAATTATAACACATGGGAATCGACTGAAAAGAAATTAGAAGCCAAAGTATTTCTTCATTGGAAAGTTGATTTTCATAAATGCATCGATGCATCTCCCCTACTTGTAGGTACTGAGGATAGTACTGTGGCGTATCTTGGTTCTCACGCTCATGTATTTAAAGCCGTGCAGTTGTCCGATGGCAAGGTGTTATGGGAGGCTCGTGTTGGTGACAGGATCGAATCCTCTGCTGCAGTATCTCGATGTGGTCGCTTTGTCATCGTTGGTTGTTATGATGGCAAAGTTTACGTATTCACTCGTAAAGATGGCACGCTAGTCTGGACATTCCAAACTGGAGGCCAAGTCAAAAGTTCGCCCTGTGTAGACCCCTCCACGGGGTTTGTTTGGATCGGATCACATGACCATCAGCTTTATGCTCTTGATGTTACTGGTAACGAGTGTGTGACGTCAATCGATTGTGGCAGCTCATGTTTTAGTTCACCCTGTATCCTAGAGGGTCATGATCTAGTATTTATATGTACCCTGGCAGGACGAGTCTTCGCTGTCTGTACCCTCCAAATGGCAATAAAATGGACCCGCCAATGTCCCAAGCCAGTCTTTGCGTCACCCCTAGCAACGCCGCAAGGTGTTCTCTGCGCATGTGTAGACGGGTCTATTTACTGTTATAGTCTCCATGGAGACGCACTGTGGGTATTTCAGACATCTGGACCGGTGTTTAGCTCTCCGTGTTTGTTTACGTCCAACATCGTGTTTGGTTCACACGATGGGTGTGTCTACTGTATTAACGATAGTGGTCAACTGACATGGAAGTTTACTACAGATTCTCAAGTTTACTCTACGCCCTTTATAACAACTGTTGAGGTTGACATTACCAGTGTGCATAGCGAAATCTCGAGGTCTGATGCTGCATCAGATAGCATAGTCATCGAGCAAGCTAATACCACCATTAACGTCAGTCCAGAAGTCCCCGTTGCTTCAAAGGCTTTCACAGTTACCAAACCCGTAGTGTTTGTGTGCTGTACAAGTGGTACACTGTACTGCCTGTCTCTACAAAGCGGACATCTCCTGACCAAGTGGGCCCTCCCTGGTCCAGTGTTTTCTTCGCCTGTTGTCAGGGGGACAAGTATTGTGATTGGCTGTCGAGACAACTATCTCTACTGTCTCGGCATAACCACTAAAATAAATGATCATTAA

Transcript

gene05264.t2

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4L235	Beta-alanine-activating enzyme OS=Homo sapiens OX=9606 GN=AASDH PE=1 SV=3
Q80WC9	Beta-alanine-activating enzyme OS=Mus musculus OX=10090 GN=Aasdh PE=1 SV=1
Q5RG49	Beta-alanine-activating enzyme OS=Danio rerio OX=7955 GN=aasdh PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004449 (this species only)
Ubiquitin family	UBD\|Other\|Beta-prp · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13570 all species →	PQQ_3	PQQ-like domain	Repeat	Interproscan
PF13360 all species →	PQQ_2	PQQ-like domain	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR018391 all species →	Repeat	Pyrrolo-quinoline quinone beta-propeller repeat	Interproscan
IPR002372 all species →	Repeat	Pyrrolo-quinoline quinone repeat	Interproscan
IPR052091 all species →	Family	Beta-alanine Activation and Resistance	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR009081 all species →	Domain	Phosphopantetheine binding ACP domain	Interproscan
IPR045851 all species →	Homologous_superfamily	AMP-binding enzyme, C-terminal domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR44394 all species →	BETA-ALANINE-ACTIVATING ENZYME	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0043041 all species →	Biological Process	amino acid activation for nonribosomal peptide biosynthetic process	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene05264.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.