Detailed information of gene05367.t1 in Actinoscyphia liui

Genomic Location: chr2:21419745...21430358
NR annotation: XP_020908250.1, uncharacterized protein LOC110246272 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003424 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01335
all species →
DEDDeath effector domainDomainInterproscan
PF01436
all species →
NHLNHL repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011042
all species →
Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR011029
all species →
Homologous_superfamilyDeath-like domain superfamilyInterproscan
IPR001258
all species →
RepeatNHL repeatInterproscan
IPR050952
all species →
FamilyTripartite Motif and NHL Repeat Containing E3 LigasesInterproscan
IPR001875
all species →
DomainDeath effector domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24104
all species →
E3 UBIQUITIN-PROTEIN LIGASE NHLRC1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0000209
all species →
Biological Processprotein polyubiquitinationInterproscan
GO:0043161
all species →
Biological Processproteasome-mediated ubiquitin-dependent protein catabolic processInterproscan
GO:0061630
all species →
Molecular Functionubiquitin protein ligase activityInterproscan
GO:0042981
all species →
Biological Processregulation of apoptotic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene05367.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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