Detailed information of gene05901.t1 in Actinoscyphia liui

Genomic Location: chr2:28212666...28225730
NR annotation: XP_031569930.1, sushi, von Willebrand factor type A, EGF and pentraxin domain-containing protein 1-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
D3YXG0Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001012 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02494
all species →		HYRHYR domainDomainInterproscan
PF07679
all species →		I-setImmunoglobulin I-set domainDomainInterproscan
PF00084
all species →		SushiSushi repeat (SCR repeat)DomainInterproscan
PF07645
all species →		EGF_CACalcium-binding EGF domainDomainInterproscan
PF07699
all species →		Ephrin_rec_likeTyrosine-protein kinase ephrin type A/B receptor-like DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003410
all species →		DomainHYR domainInterproscan
IPR013098
all species →		DomainImmunoglobulin I-setInterproscan
IPR035976
all species →		Homologous_superfamilySushi/SCR/CCP superfamilyInterproscan
IPR000152
all species →		PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR000436
all species →		DomainSushi/SCR/CCP domainInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR000742
all species →		DomainEGF-like domainInterproscan
IPR001881
all species →		DomainEGF-like calcium-binding domainInterproscan
IPR009030
all species →		Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR049883
all species →		DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR018097
all species →		Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR036392
all species →		Homologous_superfamilyPLAT/LH2 domain superfamilyInterproscan
IPR036179
all species →		Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR050751
all species →		FamilyExtracellular matrix structural proteinInterproscan
IPR011641
all species →		DomainTyrosine-protein kinase ephrin type A/B receptor-likeInterproscan
IPR003599
all species →		DomainImmunoglobulin subtypeInterproscan
IPR007110
all species →		DomainImmunoglobulin-like domainInterproscan
IPR001024
all species →		DomainPLAT/LH2 domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24034
all species →		EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →		Molecular Functioncalcium ion bindingInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene05901.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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