Detailed information of gene06009.t1 in Actinoscyphia liui

Genomic Location: chr2:29395933...29400717
NR annotation: XP_031569919.1, short-chain dehydrogenase/reductase family 9C member 7-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O75452Retinol dehydrogenase 16 OS=Homo sapiens OX=9606 GN=RDH16 PE=1 SV=2
Q8K3P0Short-chain dehydrogenase/reductase family 9C member 7 OS=Mus musculus OX=10090 GN=Sdr9c7 PE=2 SV=1
O54909Retinol dehydrogenase 16 OS=Mus musculus OX=10090 GN=Rdh16 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000445 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →
adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →
FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →
Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020904
all species →
Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43313
all species →
SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan
GO:0008202
all species →
Biological Processsteroid metabolic processInterproscan
GO:0043231
all species →
Cellular Componentintracellular membrane-bounded organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene06009.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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