Detailed information of gene06010.t1 in Actinoscyphia liui

Genomic Location: chr2:29403340...29412041
NR annotation: XP_020917493.1, 17-beta-hydroxysteroid dehydrogenase type 6 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
O54909Retinol dehydrogenase 16 OS=Mus musculus OX=10090 GN=Rdh16 PE=1 SV=1
P50170Retinol dehydrogenase 16 OS=Rattus norvegicus OX=10116 GN=Rdh16 PE=1 SV=1
Q3T00117-beta-hydroxysteroid dehydrogenase type 6 OS=Bos taurus OX=9913 GN=HSD17B6 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000445 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00106
all species →
adh_shortshort chain dehydrogenaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002347
all species →
FamilyShort-chain dehydrogenase/reductase SDRInterproscan
IPR036291
all species →
Homologous_superfamilyNAD(P)-binding domain superfamilyInterproscan
IPR020904
all species →
Conserved_siteShort-chain dehydrogenase/reductase, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43313
all species →
SHORT-CHAIN DEHYDROGENASE/REDUCTASE FAMILY 9CInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0008202
all species →
Biological Processsteroid metabolic processInterproscan
GO:0016491
all species →
Molecular Functionoxidoreductase activityInterproscan
GO:0043231
all species →
Cellular Componentintracellular membrane-bounded organelleInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene06010.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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