Detailed information of gene06170.t1 in Actinoscyphia liui

Genomic Location: chr2:31054188...31105770
NR annotation: KXJ27544.1, CAD protein [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q91437Multifunctional protein CAD OS=Squalus acanthias OX=7797 GN=CAD PE=2 SV=1
B2RQC6Multifunctional protein CAD OS=Mus musculus OX=10090 GN=Cad PE=1 SV=1
P27708Multifunctional protein CAD OS=Homo sapiens OX=9606 GN=CAD PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001107 (this species only)
Transcription factor familyzf-C2HC · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02729
all species →
OTCace_NAspartate/ornithine carbamoyltransferase, carbamoyl-P binding domainDomainInterproscan
PF01979
all species →
Amidohydro_1Amidohydrolase familyDomainInterproscan
PF01530
all species →
zf-C2HCZinc finger, C2HC typeFamilyInterproscan
PF00117
all species →
GATaseGlutamine amidotransferase class-IDomainInterproscan
PF02786
all species →
CPSase_L_D2Carbamoyl-phosphate synthase L chain, ATP binding domainDomainInterproscan
PF02536
all species →
mTERFmTERFFamilyInterproscan
PF00536
all species →
SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF00185
all species →
OTCaceAspartate/ornithine carbamoyltransferase, Asp/Orn binding domainDomainInterproscan
PF02787
all species →
CPSase_L_D3Carbamoyl-phosphate synthetase large chain, oligomerisation domainDomainInterproscan
PF02142
all species →
MGSMGS-like domainDomainInterproscan
PF00988
all species →
CPSase_sm_chainCarbamoyl-phosphate synthase small chain, CPSase domainDomainInterproscan
PF02820
all species →
MBTmbt repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002082
all species →
FamilyAspartate carbamoyltransferaseInterproscan
IPR002195
all species →
Conserved_siteDihydroorotase, conserved siteInterproscan
IPR036901
all species →
Homologous_superfamilyAspartate/ornithine carbamoyltransferase superfamilyInterproscan
IPR016185
all species →
Homologous_superfamilyPre-ATP-grasp domain superfamilyInterproscan
IPR005483
all species →
DomainCarbamoyl-phosphate synthase large subunit, CPSase domainInterproscan
IPR006132
all species →
DomainAspartate/ornithine carbamoyltransferase, carbamoyl-P bindingInterproscan
IPR011761
all species →
DomainATP-grasp foldInterproscan
IPR036897
all species →
Homologous_superfamilyCarbamoyl-phosphate synthetase, large subunit oligomerisation domain superfamilyInterproscan
IPR011607
all species →
DomainMethylglyoxal synthase-like domainInterproscan
IPR006680
all species →
DomainAmidohydrolase-relatedInterproscan
IPR002515
all species →
RepeatZinc finger, C2H2C-typeInterproscan
IPR006130
all species →
FamilyAspartate/ornithine carbamoyltransferaseInterproscan
IPR001660
all species →
DomainSterile alpha motif domainInterproscan
IPR017926
all species →
DomainGlutamine amidotransferaseInterproscan
IPR002474
all species →
DomainCarbamoyl-phosphate synthase small subunit, N-terminal domainInterproscan
IPR038603
all species →
Homologous_superfamilyFCS-type zinc finger superfamilyInterproscan
IPR005479
all species →
DomainCarbamoyl-phosphate synthetase large subunit-like, ATP-binding domainInterproscan
IPR006275
all species →
FamilyCarbamoyl-phosphate synthase, large subunitInterproscan
IPR005480
all species →
DomainCarbamoyl-phosphate synthetase, large subunit oligomerisation domainInterproscan
IPR013761
all species →
Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR003690
all species →
FamilyTranscription termination factor, mitochondrial/chloroplasticInterproscan
IPR036060
all species →
Homologous_superfamilyZinc finger, C2H2C-type superfamilyInterproscan
IPR004092
all species →
RepeatMbt repeatInterproscan
IPR029062
all species →
Homologous_superfamilyClass I glutamine amidotransferase-likeInterproscan
IPR036480
all species →
Homologous_superfamilyCarbamoyl-phosphate synthase small subunit, N-terminal domain superfamilyInterproscan
IPR035686
all species →
DomainCarbamoyl-phosphate synthase small subunit, GATase1 domainInterproscan
IPR036914
all species →
Homologous_superfamilyMethylglyoxal synthase-like domain superfamilyInterproscan
IPR006131
all species →
DomainAspartate/ornithine carbamoyltransferase, Asp/Orn-binding domainInterproscan
IPR032466
all species →
Homologous_superfamilyMetal-dependent hydrolaseInterproscan
IPR013815
all species →
Homologous_superfamilyATP-grasp fold, subdomain 1Interproscan
IPR011059
all species →
Homologous_superfamilyMetal-dependent hydrolase, composite domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11405
all species →
CARBAMOYLTRANSFERASE FAMILY MEMBERInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004070
all species →
Molecular Functionaspartate carbamoyltransferase activityInterproscan
GO:0006207
all species →
Biological Process'de novo' pyrimidine nucleobase biosynthetic processInterproscan
GO:0016812
all species →
Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidesInterproscan
GO:0006520
all species →
Biological Processamino acid metabolic processInterproscan
GO:0016597
all species →
Molecular Functionamino acid bindingInterproscan
GO:0016743
all species →
Molecular Functioncarboxyl- or carbamoyltransferase activityInterproscan
GO:0006807
all species →
Biological Processobsolete nitrogen compound metabolic processInterproscan
GO:0005524
all species →
Molecular FunctionATP bindingInterproscan
GO:0046872
all species →
Molecular Functionmetal ion bindingInterproscan
GO:0016787
all species →
Molecular Functionhydrolase activityInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0006355
all species →
Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008270
all species →
Molecular Functionzinc ion bindingInterproscan
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0003690
all species →
Molecular Functiondouble-stranded DNA bindingInterproscan
GO:0004088
all species →
Molecular Functioncarbamoyl-phosphate synthase (glutamine-hydrolyzing) activityInterproscan
GO:0005737
all species →
Cellular ComponentcytoplasmInterproscan
GO:0005951
all species →
Cellular Componentcarbamoyl-phosphate synthase complexInterproscan
GO:0006526
all species →
Biological ProcessL-arginine biosynthetic processInterproscan
GO:0016810
all species →
Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bondsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene06170.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP