Detailed information of gene06171.t1 in Actinoscyphia liui

Genomic Location: chr2:31106024...31118451
NR annotation: XP_020896089.1, lethal(3)malignant brain tumor-like protein 3 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q96JM7Lethal(3)malignant brain tumor-like protein 3 OS=Homo sapiens OX=9606 GN=L3MBTL3 PE=1 SV=2
E1C2V1Lethal(3)malignant brain tumor-like protein 1 OS=Gallus gallus OX=9031 GN=L3MBTL1 PE=3 SV=1
Q8NA19Lethal(3)malignant brain tumor-like protein 4 OS=Homo sapiens OX=9606 GN=L3MBTL4 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002063 (this species only)
Transcription factor familyzf-C2HC · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00536
all species →		SAM_1SAM domain (Sterile alpha motif)DomainInterproscan
PF01530
all species →		zf-C2HCZinc finger, C2HC typeFamilyInterproscan
PF02820
all species →		MBTmbt repeatDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004092
all species →		RepeatMbt repeatInterproscan
IPR001660
all species →		DomainSterile alpha motif domainInterproscan
IPR013761
all species →		Homologous_superfamilySterile alpha motif/pointed domain superfamilyInterproscan
IPR002515
all species →		RepeatZinc finger, C2H2C-typeInterproscan
IPR038603
all species →		Homologous_superfamilyFCS-type zinc finger superfamilyInterproscan
IPR050548
all species →		FamilyPolycomb group and chromatin remodeling factorsInterproscan
IPR036060
all species →		Homologous_superfamilyZinc finger, C2H2C-type superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12247
all species →		POLYCOMB GROUP PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005634
all species →		Cellular ComponentnucleusInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0008270
all species →		Molecular Functionzinc ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K24387L3MBTL; lethal(3)malignant brain tumor-like protein-Chromosome and associated proteinsko03036deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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