Gene detail

Detailed information of gene06262.t3 in Actinoscyphia liui

Genomic Location: chr2:32087516...32102154
NR annotation: XP_031549821.1, cathepsin K-like [Actinia tenebrosa]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene06262.t3

AAACAGCCAGCAAAATGTAGCACTACTTTAATCACGTGAGTTAATGGTGTCAAATTGCATAACTCTTCATAAGACAGACAATTCTCTAAGACGAACAGTTGGTGGTGGTCACTACATGAGTAGTGAAGAGGCTGAGAGAGCGGAAAGTAAAAAGTGCGAGAAATAACGAACAACAGTACAGTACCGTTCATACAACTTCGCAGATTACTTTTGATATCATGACCATTCATTGCGTTATCGCCTACCAAGTATCACGCTTGAGTCGGCACCTGTTAAAGGCCGTGACACACTATACCTGCTCATATACAATACTGGAAATTTTTGTTTTATTTTTGTTGCAGAAAAGCACTTCTAGAGAGTGGAAACTTTTATTTATGATCGAAAACTAATATAATAATTCCATGAAACAGCGATTCGAATTTTATAGCGCAGTGCGAGTGTGTTTATTGATTGTGATAAGTCTTACCTTCCCGCCATTTGAACCTCATTGTTTTACCATCAAACGAAAACAAAAAGCAATAAAATATTCATTTCAATCAAGGTTACTTCAAGGTTAATATTCACTGCTCGACAACTGGAGCGTAAAGCTTACTGATATTCAAAATGGCAGCTTTTTTCTCGTCGTTCGAACAACAGATCGTTTGTTCTCAGGCCTTTACTGTTATATGACAACCAGGAGTATCAATTAGTTATGCCACCCAACATGTTTATAGATGAATGTTAAGGTTCTACTCTCAAGGGATTAGTAGACAGGAACACACAGACGGAATTGAAATCATTATGGCGACATAACGCGGTACGAAGCGTTTTGATAAAACAACACAATGGCTGAAGATAGGACTTGTCTATGGACCGTCTTGGTATCGCTTACTTCCCTGGCAGCCGTGCTTTTTGGGGTTCACTGTCTTGTTCGTTACCAGTCCATTCTCGATCATCACAAGCGCGATTCACGTAGTGACGACTTATATGATGACGTTTATCATAGGATGTTTCCAAGGCGTTACCATAGTGATATGTATGATGACGTTGACGATGGGATGTTTCCAAGGCGTTACCATAGTGATGTATATGATGACGTGTATGATGGGATGTTTCCAAGGCGATACCACGCTACTGGCTTTCTAAGCCTGCCCTTTGACGACATCGTTGAACCGTTCGAGGCGTGGTTTGCAGGCGATGTCAACTCGAGTAGAATAGACTATTATCACGGAATGGACAAAACCATCCAGCGAGGTGACATCGGACAGCATGGTGAAATGTTCAAGATCGTCCCCATGCACTCAGACATCAGTCCATCGGACAACGACTACATAAGCTGTTGGTACAAACCTTTACCTAAATGGCTGCACAGAAAAGGGCAGACTGTCGTGCCGACAGACCTTGCGAACTTTTCTATGTTAGGAAAAGAGGTCCACAGAGGGAAAATATGCTACAAGTTTGAGAGAAAAAACACGCAGTTCAATAAAACCAACACTTATATATTATATGTCACTGCGCATGCGCCCCATCGTCCTTTGCGCTACGAGATGATAGGCTATGACGACATGCTGACATCACACTACGATCATTACATTCTTGACTACACGACGTTTGAGCCTTGGCAGATGAATTCTACAATATTTGATGTACCAGAAAAAATAAAATGCAAGAAAAAGCAACGAATCAAATCCACGTACTTCATGAATCCCATGGCAGAGTTTCTGCATTTTCACCATGCTAAGGACAAAGAGCTGGAAAAGTCTTATCACATCTACAAGAAAAAACACAAAAAAGCTTACAACTCACGGCTAGAACATGACACTAGAAAACACATTTATAAACACAACATCAGATTCATTCATTCAAAAAATCGACAAAATCTCAAATATGTTTTAAAGTCAAATCACATGACTGACCTGACTGATGATGAAGTGCGAGTTCAAAACGGCTTGATTCACGATCACCTAAAGAAACCAACCAAACATTTGGATTTCAACATCAGTAAAGCTTTGCAGGAAATACCTGAGAATCTAGACTGGAGGGATTATGGCGCTGTGTCTCGTGTACATAGTCAAGGATTGTGTGGTTCTTGCTGGGCTTTCTCTGCCCTGGGAGCAGTCGAGGGGATGAACTTCCTCAAGACAGGAAAACTAGTCGAACTTTCAAAGCAACAACTTCTAGACTGTTCGTGGCCTGTCGGTAATCATGGCTGCAGGGGAGGCTTTCAAGCTAGAACTCTACGATGGATCAAGAGAAATGGTGTTGCTACTAAGAGAGATTACGGAAAGTATCTTGCTCAGATTGCCTTGGCAACGCATGGACCAATTACATCTTCAGTGAACGCTGACCCCAAAACCTTCAGGTTTTACAGTCATGGCGTTTATGACGACGTGCATTGCAAACGAAAGACAAACCATGCAGTTCTTACGGTTGGCTATGGCAACTACAAGGGGACTTCTTATTGGTTGATTAGAAACTCGTGGGGTCAGCTGTGGGGAGACAAAGGTTACATCAAGATTGCAACCAAACATGATATTTGTGGTTCCACCAGCGGTTCTCTTATCGCTGTTAAAAAGAGTAAAGAAATCAAGGAATTTCCCTTCAAATACCTTACAAAGGTGCCAAGGTCACGTGATGACTTCTCTAGAGAACTAGAGGAGGAAATGGAACCCCTTCCATTCAGATGACACATGACGTCACTTCCGGTCTAGAATTTTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A1S4F2V5	Cathepsin L-like peptidase OS=Aedes aegypti OX=7159 PE=1 SV=1
O70370	Cathepsin S OS=Mus musculus OX=10090 GN=Ctss PE=1 SV=2
Q8HY82	Cathepsin S OS=Saimiri boliviensis boliviensis OX=39432 GN=CTSS PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000586 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08246 all species →	Inhibitor_I29	Cathepsin propeptide inhibitor domain (I29)	Domain	Interproscan
PF00112 all species →	Peptidase_C1	Papain family cysteine protease	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013201 all species →	Domain	Cathepsin propeptide inhibitor domain (I29)	Interproscan
IPR025661 all species →	Active_site	Cysteine peptidase, asparagine active site	Interproscan
IPR000169 all species →	Active_site	Cysteine peptidase, cysteine active site	Interproscan
IPR000668 all species →	Domain	Peptidase C1A, papain C-terminal	Interproscan
IPR039417 all species →	Domain	Papain-like cysteine endopeptidase	Interproscan
IPR038765 all species →	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR025660 all species →	Active_site	Cysteine peptidase, histidine active site	Interproscan
IPR013128 all species →	Family	Peptidase C1A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12411 all species →	CYSTEINE PROTEASE FAMILY C1-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008234 all species →	Molecular Function	cysteine-type peptidase activity	Interproscan
GO:0004197 all species →	Molecular Function	cysteine-type endopeptidase activity	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0005764 all species →	Cellular Component	lysosome	Interproscan
GO:0051603 all species →	Biological Process	proteolysis involved in protein catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene06262.t3.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.