Gene detail

Detailed information of gene06534.t1 in Actinoscyphia liui

Genomic Location: chr2:34740525...34752820
NR annotation: XP_020916691.1, anaphase-promoting complex subunit 7 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

gene06534.t1

CGAACTATCAGCATTAGCATAAGGGGAATTCTATAACCCGATTTCGTGAAACATGGCTACACTGGAGGACGTCAAAGCGTTGCATGATCAAGGGCTCTTCTCCAGTGCACAACTACTGGCAAGTTTTCTATTATCAGCTCAAGAGAATGAAACCTCTGACAAACAAGACATACAGAGTATGGCTAATAAATATACATTAATGGTCATTATTGCCAACTGTTTGTACGAAGATGAACAGTATCGCAGAGCAGAACATCACTACAACAAAGCGTTACAGTTTAGGAAGGTCATCAGCAAGAATAAAACCAAAGCAACCACATCAATGGGCTTAACACCAGAAGTGGAAGTCAAGTATAAACTGTACCAGTGTTACAGTCAAATGAAAGAACACAAAGATGCTATAGCAATTCTCGAAGGAGTTTCCCAGAAACAGAGAACCCCAAAGATAAACATGGCTTTGGCTAATTTGTACCAGTGGCAGGGAATGGAAAGGTCTTCAATCTCATGTTATAAAGAAGTACTAAGGGTTTGTCCTACTGCGCTTGATGCAGCACTGGGATTACTAAAATTAGGTGTAACAGCATCGGAAGTCATATCCCTGGTTACAAAAAATCAACAGTCTACGGCTGCAGGATCAGCTAATTATGACTGGTTACCAGCATGGATAAAAGCCAAGGCACTTGAAGCAACCAGCAAACATGCAAAGGCTGCTCCTTCACTAAAGTCCTTGGAGCAACAAGCTTTACATGACAATGTGGAAATACTGTGCGACACAGCAGAGAACTTTTACCAAGCTGGGGATGTAAAGAATGCTAAGGCAGTGTTTCAAAGGGTTCATCTGATTGATCCCAACATGTTACAAGGAATGGACATGTACGCACATCTGCTTGCGCAGGACAACAATGGAAAGGAACTAGAAAAACTTGCAAAGGATTTAATACAAGTCACTCAGTCTAAGGCAGAACCATGGATTGCAATGGCACACTTTTGTAACTCAACAAATCGTAAATCTAGAGCAGTATACTTTGCTCAAAAGGCCCACACAATTGATGTTCGCAATGTACAAGCTCTCATCCTCAAAGCTTCCCTTCTTCAAACACTTCACAAGCAACAAGAAGCCTTGATTCACTACAGAGAAGCCGTCAAGATTTCACCAGCAAATTTTGAAGCAATCAAAGGTTTAGTAGAGTGTTACATGGATGCAGATAGATACAGAGATGCCATGGTTGTGGCTAAAAATGCCCACAAGGCTCTTGGGGCTACTGCAAGGACTTTAACATTGTGTGCGACAGTAATGATGCATGAATCATCAAACAATGACAAGGCCAAAACAATGCTTGAAAAAGCACTGACTCTCGACCCATCGTCAACTGATGCAGTCTGTCTTCTTGCTGAAGTACATGGAAACAAACAAGAATACAACAAAGCTATAGATTTACTTAGAAAACATCTGATTAACCATCGGACTGCAAGACTCCATCAGTTATTAGGTGATTACTTGGCGGGGATTAATGAGTACCAAGAAGCACTGGACCAATACACCAAGTCTCTCAGCTTAAATCCAGGATACAGCAAAGCTATAGAAGGAATTCAGAATGTAGAAAAACGCAATGGATCAGTGGATTTGGATAGTGATGATGATCCCCTTGATACTAACAATGCTGAGGTCATCAGCCTAGAAGAGGATGATGTAGAGGATGCAGCATCGTGGACATCTCAAGACCTTCAAGGGCCGTTGTTTTGATTAAATAATTAGTACTCGCAACAGAGTACTAACAGAGTACTTCAAGAATGCATAATCCTTGGCTGGAATGTCGACTATACTAGGGTGGATCAAGACCCCAGTTCTCGAAAGACCCGACATCATGCCGGACCCGTTAACTAACCCGTTTAGCACCCGATAAATTGTACGTGCGTTTCCCTAAGCACGTTTACAGTCCTAAAAATATTTGCGTTCGTTCACGGGGAAGCTGAGGGGAGCCCGCATCATCCCACAAACGTACTGTAAATTAACAGGTACGAAAAGCTAGTTATTGGGTCTTTTGAGAAACGGGCACCACTGAGGAACATTAAGCCTCGAATTGTAAATAGTCATAACTGTATTATATATTATTAATAGTAGCAACAAGCTAGTCAATCTCTTTTAAAATTAATAAATTAATATATCAGAACAAGAAAATTTTACGTCGTGTGGACTCTCTTGAAGCTAACTG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9UJX3	Anaphase-promoting complex subunit 7 OS=Homo sapiens OX=9606 GN=ANAPC7 PE=1 SV=5
Q9WVM3	Anaphase-promoting complex subunit 7 OS=Mus musculus OX=10090 GN=Anapc7 PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004538 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12895 all species →	ANAPC3	Anaphase-promoting complex, cyclosome, subunit 3	Repeat	Interproscan
PF09295 all species →	ChAPs	ChAPs (Chs5p-Arf1p-binding proteins)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR015374 all species →	Family	Chs5p-Arf1p binding	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12558 all species →	CELL DIVISION CYCLE 16,23,27	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005680 all species →	Cellular Component	anaphase-promoting complex	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan
GO:0045842 all species →	Biological Process	positive regulation of mitotic metaphase/anaphase transition	Interproscan
GO:0051301 all species →	Biological Process	cell division	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K03354	APC7, ANAPC7; anaphase-promoting complex subunit 7	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.