Detailed information of gene06591.t1 in Actinoscyphia liui

Genomic Location: chr2:35390623...35413677
NR annotation: XP_020905504.1, mediator of RNA polymerase II transcription subunit 13-like isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q71F56Mediator of RNA polymerase II transcription subunit 13-like OS=Homo sapiens OX=9606 GN=MED13L PE=1 SV=1
Q6JPI3Mediator of RNA polymerase II transcription subunit 13-like OS=Mus musculus OX=10090 GN=Med13l PE=1 SV=2
Q9UHV7Mediator of RNA polymerase II transcription subunit 13 OS=Homo sapiens OX=9606 GN=MED13 PE=1 SV=3
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003809 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF06333
all species →
Med13_CMediator complex subunit 13 C-terminal domainDomainInterproscan
PF18296
all species →
MID_MedPIWIMID domain of medPIWIDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR009401
all species →
DomainMediator complex subunit Med13, C-terminalInterproscan
IPR051139
all species →
FamilyMediator complex subunit 13Interproscan
IPR041285
all species →
DomainMID domain of medPIWIInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR48249
all species →
MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT 13Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003712
all species →
Molecular Functiontranscription coregulator activityInterproscan
GO:0006357
all species →
Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016592
all species →
Cellular Componentmediator complexInterproscan
GO:0003713
all species →
Molecular Functiontranscription coactivator activityInterproscan
GO:0045944
all species →
Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene06591.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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