Gene detail

Detailed information of gene06602.t2 in Actinoscyphia liui

Genomic Location: chr2:35522786...35525260
NR annotation: XP_020896076.1, cytosolic carboxypeptidase 6 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5VU57	Cytosolic carboxypeptidase 6 OS=Homo sapiens OX=9606 GN=AGBL4 PE=1 SV=3
Q09LZ8	Cytosolic carboxypeptidase 6 OS=Mus musculus OX=10090 GN=Agbl4 PE=1 SV=1
Q09296	Cytosolic carboxypeptidase 6 OS=Caenorhabditis elegans OX=6239 GN=ccpp-6 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008660 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18027 all species →	Pepdidase_M14_N	Cytosolic carboxypeptidase N-terminal domain	Domain	Interproscan
PF00246 all species →	Peptidase_M14	Zinc carboxypeptidase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040626 all species →	Domain	Cytosolic carboxypeptidase, N-terminal	Interproscan
IPR050821 all species →	Family	Cytosolic carboxypeptidase	Interproscan
IPR000834 all species →	Domain	Peptidase M14, carboxypeptidase A	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12756 all species →	CYTOSOLIC CARBOXYPEPTIDASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0035610 all species →	Biological Process	protein side chain deglutamylation	Interproscan
GO:0004181 all species →	Molecular Function	metallocarboxypeptidase activity	Interproscan
GO:0006508 all species →	Biological Process	proteolysis	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K23439	AGBL4, CCP6; cytosolic carboxypeptidase protein 6	EC:3.4.17.24	Peptidases and inhibitors	ko01002	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.