Detailed information of gene06665.t1 in Actinoscyphia liui

Genomic Location: chr2:36296647...36320368
NR annotation: XP_028516869.1, chromodomain-helicase-DNA-binding protein 1-like [Exaiptasia diaphana]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7ZU90Chromodomain-helicase-DNA-binding protein 1-like OS=Danio rerio OX=7955 GN=chd1l PE=2 SV=1
Q3B7N1Chromodomain-helicase-DNA-binding protein 1-like OS=Bos taurus OX=9913 GN=CHD1L PE=2 SV=1
Q86WJ1Chromodomain-helicase-DNA-binding protein 1-like OS=Homo sapiens OX=9606 GN=CHD1L PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12770CHATCHAT domainDomainInterproscan
PF13181TPR_8Tetratricopeptide repeatRepeatInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan
PF00176SNF2-rel_domSNF2-related domainDomainInterproscan
PF13424TPR_12Tetratricopeptide repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR024983DomainCHAT domainInterproscan
IPR019734RepeatTetratricopeptide repeatInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR049730DomainSNF2/RAD5-like, C-terminal helicase domainInterproscan
IPR011990Homologous_superfamilyTetratricopeptide-like helical domain superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR031053FamilyChromodomain-helicase-DNA-binding protein 1-likeInterproscan
IPR043472Homologous_superfamilyMacro domain-likeInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR000330DomainSNF2, N-terminalInterproscan
IPR038718Homologous_superfamilySNF2-like, N-terminal domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR47157CHROMODOMAIN-HELICASE-DNA-BINDING PROTEIN 1-LIKEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0003678Molecular FunctionDNA helicase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006974Biological ProcessDNA damage responseInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0140658Molecular FunctionATP-dependent chromatin remodeler activityInterproscan

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