Gene detail

Detailed information of gene06868.t2 in Actinoscyphia liui

Genomic Location: chr2:38812620...38818435
NR annotation: XP_031551475.1, UDP-glucose 4-epimerase-like isoform X2 [Actinia tenebrosa]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5R8D0	UDP-glucose 4-epimerase OS=Pongo abelii OX=9601 GN=GALE PE=2 SV=1
Q8R059	UDP-glucose 4-epimerase OS=Mus musculus OX=10090 GN=Gale PE=1 SV=1
Q14376	UDP-glucose 4-epimerase OS=Homo sapiens OX=9606 GN=GALE PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004276 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16363 all species →	GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005886 all species →	Family	UDP-glucose 4-epimerase	Interproscan
IPR016040 all species →	Domain	NAD(P)-binding domain	Interproscan
IPR036291 all species →	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43725 all species →	UDP-GLUCOSE 4-EPIMERASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003978 all species →	Molecular Function	UDP-glucose 4-epimerase activity	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan
GO:0033499 all species →	Biological Process	galactose catabolic process via UDP-galactose	Interproscan
GO:0006012 all species →	Biological Process	galactose metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01784	galE, GALE; UDP-glucose 4-epimerase	EC:5.1.3.2	O-Antigen nucleotide sugar biosynthesis	ko00541	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.