Detailed information of gene06885.t1 in Actinoscyphia liui

Genomic Location: chr2:39040496...39046776
NR annotation: XP_020902877.1, ubiquitin-conjugating enzyme E2 W isoform X4 [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q28FC1Ubiquitin-conjugating enzyme E2 W OS=Xenopus tropicalis OX=8364 GN=ube2w PE=2 SV=1
Q1JPX4Probable ubiquitin-conjugating enzyme E2 W-B OS=Danio rerio OX=7955 GN=ube2wb PE=2 SV=1
A6H795Ubiquitin-conjugating enzyme E2 W OS=Bos taurus OX=9913 GN=UBE2W PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008138 (this species only)
Ubiquitin familyE2|UBC|UBC · all ubiquitin genes in this species
Ubiquitin familyUBD|UBC-like|UBC · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00179
all species →		UQ_conUbiquitin-conjugating enzymeDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050113
all species →		FamilyUbiquitin-conjugating enzymeInterproscan
IPR016135
all species →		Homologous_superfamilyUbiquitin-conjugating enzyme/RWD-likeInterproscan
IPR000608
all species →		DomainUbiquitin-conjugating enzyme E2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24067
all species →		UBIQUITIN-CONJUGATING ENZYME E2Interproscan

 Gene Ontology
No Gene Ontology signature was detected for gene06885.t1. This gene does have a gene model — the search simply returned no hit.
Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K10688UBE2W, UBC16; ubiquitin-conjugating enzyme E2 WEC:2.3.2.23
EC:2.3.2.25
Ubiquitin systemko04121deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP