Gene detail

Detailed information of gene07291.t2 in Actinoscyphia liui

Genomic Location: chr2:45098915...45142177
NR annotation: XP_020912901.1, E3 ubiquitin-protein ligase TRIM37 isoform X2 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

gene07291.t2

ATGGACGAGAACTCTGTAGAGAGTCTCTCAGAGGTGTTCAGATGCTTTATATGCATGGAAAGACTGCGAGATGCAAGGCTCTGTCCTCATTGCTCCAAACTTTGCTGTTTCTTATGTATAAGGAAATGGCTGACAGAGCAGCGTCCTCAGTGCCCTCACTGCAGAGCATCACTGCACCTACATGAACTGGTCCACTGTCGATGGGTGGAGGAGGTTACACAGCAATTAGACTCTCTTCAATTAGCTGCACCAACCAAGGGCAGAGAAGACGCTGAATTAAAAGACAGATGTGAGCTTCATCATGAGAAGTTGAGCGTTTATTGTACAACTTGTAAAACGTGTATCTGTCATCAATGTGCACTGTGGGGTGGTACGCACTCCGGACACAACTTTAAACCACTTGATGAAATCTACGACCAGCATGTATCGTCCATTACTGACGAGGTGGCGGCGTTACGAAGGCGTTTAATGGAACTAATCAGCCTGGTGCAGGAAGTGGAAAGAAATGTAGAAAGTCTTAGGGAAGCCAAAGAGGAGCGCGTACGAGAGATCCGTAACGCCGTAGAACTGATGATCGCCCGACTTGACTCGCAACTCAAGAGCAAGCTGTTGACTCTCATGGGTCAGAAAAACTCACTTACACAAGAAACCGAACTGCTAGAGTCTTTACTACAAGAAGTTGAACACCAGTTACACTCGTGTTCAAGAAGTGAACTCATAGCTAAAAGTGGTGAATTACTACAAATGTTCAACCAAGTACATCGCAAACCCATGGCTTCTTTCGTTACTCCACCAATACCTGCTGACTTCTCAAGTGAAATAGTGCCTCCTTACGACACCAGTACATTTTGTATCACAAACTTCAGCATGCTTAAACGTAAAGCCGACCCAGTTTATAGTGAACCACTGAACGTTAATGGGCTGAGTTGGCGGCTCAAAGTTTATCCTGATGGTAACGGTGTGGTTCGTGGTAATTACCTCTCGGTATTCTTGGAACTGACAGCAGGCCTGCCAGAAACCTCAAAGTACGAATATCGAGTAGAAATGGTCCATCACGCCTCACCTGATTCCAGTAGGAATATCGTCAGAGAATTCGCTTCAGATTTTGAGGTCGGTGAATGCTGGGGATATAATCGTTTCTTTCGTCTGGATTTTCTGTGTTTTGGTCTCAAAGAGGATCTAGCGATGACAACAAACGTAGTTATTGCTGTTATTCTTCTGGCATCGATTTCTTTTTGTTTGGGTTTTCATAAACCCTTGAAGATCTCACGACACACCCAAACCTACAAAAGACAGCTGCAGTCACTACCAGAACTAAGAAGTGATCAAGACAAAAGTATCCTAAAAAGAAAGCATGGCGAGACTTTATCTCACATCCATCGTGGGATTGACTCAAATTGGAAAGTGTCATCAGTTCGCCGAACTTCAAGGTCCATTCTCGATCTTGGCACTGGTGAAAAGACATCATATAGCGAGAAGGATCTGGAATTAAATGCAGATGGGATCGCAAATGCGCATATCGAGAGAACACACGACTTAGAAGAGATTGAAATCGAATTAAGAAGCGATTCCAAAGATATTCTTCTTTCAAGACATCGTCGTGGTGTACCTTCTCAACTCATTTGTAATTCAACCTTCCTTTCGTGCAAACACAGATGTCTGGACAGAAGAGACCATGGGGGAGTTGATAAGGAATTACGCTGTTCCTGTGATCCTTATTGCAACTACTTCAAGGACTGTTGTCATGACTACGTAACGTATTGTCTGAAAGATCCAGGATCCTCCCATATCACTTTAAAAGTCCCCGATGAACAATGGTCCTGTCGAAACGGAGTTTGGATGATTACGTTATGTCCCAAGTCTTGGTCAAACCAAAACGTTTGCAAGTCCTGCAGCAATGTCACCATAATGACTCACGTGAATTATGCAAATGTACTGCCTGTCACTACCCCTGACAACAAAACTTTCGCCAATCGATTCTGTGCTCAGTGTCATGGATACCAGCTGAACCAAATGGAGTTTTATCCTCTTGATTCTAAGTGTCTCTTGTCACCATCCAGCAGGGCGACACAAGAAGAACAAATTCAATTTATTTTTAAAAATTGTGATGTGTTTTCCAACTCACCAAAGAATGGTACATTAAGAAGACCTTGCAAGCCCGTGCCCGAGGATGCGTGTACAGATCATTCTGCGACCATTGAAACTCGAGGTAAATGCATAAATGGTTCGTATGGACTCGTGTACATTATCGGGAAAAGACGCACTTTTAAGAACGTATTTTGTGCAAGATGCTGTGGTTTGGATCCAGAAAAACTTGAATCTCGATGTGGACCAGGACCAGGATCAAAAGAATTGAGCTCTACAAAAGGTGGTGCATCAAAACCATTTTCTTTGATATTGGAAATTGGTAAATCGTCTGGACAACAAGCAAAGCAAGTTTCCTTCATAATCTCATGTCCTACTCGAAAAGTTTATGACTGGTATTTAGAAACATGTCGAAAGGGAGAACAATTCGTTCCTGTCGTATCCAACTTCAAAATGTATCGAGTGGCATTCTGGATCAAGTGTATTGGATCCTTTCAAACTCAAGATTTTATTAATTGTATTTCTAAAGAACTTATGGTTAATTCAACAGCATTAACAATTATTGGTTCGACTATCCTTGACAGGAAACAGCGGCTCCTTTTGATTCTATTTGACTTAACCATACCAAAGAACTTTGAAGAAGAACAAACAATGAATGTATTAACTGACCTCTTGAAACTCACTCATTCACCAAAAAAACTCTTCAAAATTGGCTTTTTAAGATTTCAGGCTGTCAAAATTTCTTTCAAACCCCTGACTTGTGTTCTCGCAGACACTTATTCGCCCACGGAATACGATGTAATTTCCGGCACTTCTTCCATCTACATCAACAAAACAGGAGAATTGTTGAACAAGAAAGACTACTTCTCCAACAGTTCAAGAATGGTCCAAGGTCATCCACAGCCTGTAGGGCACATAGTGGTCTGTAGACAAATGCTGTCAGGGAATTGTTCTGGTACCTACATTTTCCTGCAAAGACATGAGTACACTATTTTCCCCAATCGATCTTTGTTATATAATGCGACGGGTCGTCTGTACGAGAATGGAGAGTACACGTGGAGAAATGGAACTGCAGTGGTATGCACATATTTTGCAACCATCTATGAACAGTACAACAAAAGCACTCCAGTGAATGACCCACCTGGTCTAACCATCCTGACGTACATCGGGTTTTCCATATCAGTACTTTGTTTGGTGTTTGTACTGGTCACCTACTCTCTGTTCCCAGCACTGAAAACAATTCCTGGAATCAACTTGATGAACCTCTCCTGTGCTCTGCTTGTGGCACACTTGTTATGGTTGGTAGGATCAGGACTGACATTCACTGGGAAAGTCTGCACCGCCATAGCAATAGTGCTTCATTACAGTTTTCTGGCCTCTTTTATGTGGATGTCCATCATCGCTTTTGACACGTGGAAAGTATTTTCCCATGTCGAATCCTGCCGTTCTTCGAGAAACGAAAAAGCCAAAAAGCGCAAACGCATTGCTTTCACGATGGCAATTGGCTGGCTTCCACTGATAATCTACTTGTCCGTTTGTGTGGCTTTAGATCAATCAGAAGTAGTTGACATTGGATATGGGGGTATAAAAGGCTGCTGGATCAACGACTCGTGGGCGAACCTGTATTTCTTTGCCATACCAGTGGCCGCCTCTATTCTTTGGAATGCAGTGTTTTTCCTCCTTGTTGTGAAATCCATTAGGAAAACAAGAGAACAGTCCCAGATGGTTACTGGCCAATCTCGAAATGATTCAGCAATATACACCAGGATTGCAGTGTTGATGGGGTTCACATGGGTGTTTGGTTTTCTAGCACCGTTTACATCGCAGTATCTAATGTATCCCTTTGTGATTCTCAACACTCTCCAAGGTTTGTACATTGCTGTGGCTTTCTGCTTAACAAAAAGAGTCAGGTTGTTGTATCAAGGCCTTTACTCGGATATGGCTAGTGAAGGATATCTCAATACAGCAAATGATACTCTTATTCTACGATTCCAAGTCAGACCACCAACGTTCTACCAGAAATGCCGTGACCAGCAGTGGTATATCAATCAACTGGAGACTAGTCAACTTCAATACATTCAACAAATGAACGACCTGAAAGAGCGACTAGCGATCGAACTGTCCCGCAACCACCCTGCTCCACCATCGTCCGCTGCTGCATCACCTGATCGAAGTCACGTGTCCCTTCTGGAACAATCGATCGACAACGATGACGAGTCCGCTGACCAGACGGTTACCAAGGAACCAAGAAATAGCGTTAAAAATATTTATGGCAAAAATAGCAGTTGCAATAACGCCAAGAAAACACGCATAGCACTTCATACTGCTATAGACATTGAGTTGGCTACAGGACCAGTTCAGACGTCAGAGGAAGGTGAGGAGATAACTGGTGAAGAGAATGCAATGGACATCGACGAGAACCAGGACGATGTCGACGAAGACGATGACAACGACAGTCGCGATGATACCGACGATGAAACACTCAATGAGTTTGAATGTAATGTGTTAGAAGAAGCCGCTTCTGAGCCTGAACCTGATGGCGTAGTAGAAGAGAAACAAGCTGTCATTCATGACGAAGATCTACAGTCTAAGTCAGACAGTCACTACCTGGCCCAGACGGACGACAGTGAGTGGGAGACACAAGAAGAGGACGAAGAGGGCTGGACCCTAGAGGATGTAGAAGTCGAACTGATAGAACCAGATAACGAAGAGAAAAGAGAGGAAAACGACGAACAGGAAGAAGAAGCTGAAGCGTCTGGAGCGACGAGAGACGCGTTATCGTTCTTCGAACCTGAAGCGCGAGTTTTACTGAATTTAATCAAACTCAGTGAATCGGGGTCCCGCTGGAAGACCAGCAGCCCCACGAGGAAGGCGGTGTCCCTTGTAGAAATGCCACGGTCTGAAGAGAAGGCTGCTTCTAGACGCAGAGCTCGATATGAACGCTGCAGCAGCATGCTGGAGAAGCTGCAGAGTTGTTTAAATCGAGCTGAAGCCAAGAGCTCGGCAGCCGCTTTGGAGAGCATGAAACATCTTGAAGAAGCCATGGCTAACGCAGCCTCGGGATACCCCAAACATTCACGTGATCGAAGACAAAGACGGGGAGCGTCGTTACCAGTTGTCAGTAACAATTCAAGAACCAAGACATCACCTAAAAGAGATTGTGACACCTGTTCCGTGGTACCAGATCCAGACGTAGGGGGTTGTAGCCCAGAGTTAGACACTCAGAACACACCATCCAGTCATAATGTACCCGAGAAAATCGATAGCCCTAATAATAGCAGACAGACAGCACATACAGGTGTCAGAGTCAGAAAGGTAGTCCGATCAAATGGAAACTCTTCTGATATAGGCCGCGATGGTCTGGAAAGAAGCTCACAACTTCTCTCTGAGCTAAAGCGCGCGTCGACGTTAAACAAAGCATACAGGCTTAGCTTCACCAGTCCTGAGGAAGAGGAGTTACTACGTGCCCTAGATACAACATCCAAGAATAAAGAAAATTCAGATTGTGAGGAAAGAGACAGTGTCTTATACGTAAGCACACATTCATCTGATGATGACGAGTTTGCGTCATCTATTACGTCAGACGATCACGTGGTCTCGTCATCCAATGTTGCCGAAGAAAGCTCACCCAATAGCAGTGAGACTAATCGCGATCGCCAAGAAATCAACTGTAGCGACCCTCTGCAAGCAAGGGATATCCAGTAA

Transcript

gene07291.t2

ATTTGTAATGTCAATTTCTGTTGGCGTCTAAATGATCGAGAAAATCGACAGCAAACGATCATAAATTCAAGATTTATACATCAGTGAAGATGGACGAGAACTCTGTAGAGAGTCTCTCAGAGGTGTTCAGATGCTTTATATGCATGGAAAGACTGCGAGATGCAAGGCTCTGTCCTCATTGCTCCAAACTTTGCTGTTTCTTATGTATAAGGAAATGGCTGACAGAGCAGCGTCCTCAGTGCCCTCACTGCAGAGCATCACTGCACCTACATGAACTGGTCCACTGTCGATGGGTGGAGGAGGTTACACAGCAATTAGACTCTCTTCAATTAGCTGCACCAACCAAGGGCAGAGAAGACGCTGAATTAAAAGACAGATGTGAGCTTCATCATGAGAAGTTGAGCGTTTATTGTACAACTTGTAAAACGTGTATCTGTCATCAATGTGCACTGTGGGGTGGTACGCACTCCGGACACAACTTTAAACCACTTGATGAAATCTACGACCAGCATGTATCGTCCATTACTGACGAGGTGGCGGCGTTACGAAGGCGTTTAATGGAACTAATCAGCCTGGTGCAGGAAGTGGAAAGAAATGTAGAAAGTCTTAGGGAAGCCAAAGAGGAGCGCGTACGAGAGATCCGTAACGCCGTAGAACTGATGATCGCCCGACTTGACTCGCAACTCAAGAGCAAGCTGTTGACTCTCATGGGTCAGAAAAACTCACTTACACAAGAAACCGAACTGCTAGAGTCTTTACTACAAGAAGTTGAACACCAGTTACACTCGTGTTCAAGAAGTGAACTCATAGCTAAAAGTGGTGAATTACTACAAATGTTCAACCAAGTACATCGCAAACCCATGGCTTCTTTCGTTACTCCACCAATACCTGCTGACTTCTCAAGTGAAATAGTGCCTCCTTACGACACCAGTACATTTTGTATCACAAACTTCAGCATGCTTAAACGTAAAGCCGACCCAGTTTATAGTGAACCACTGAACGTTAATGGGCTGAGTTGGCGGCTCAAAGTTTATCCTGATGGTAACGGTGTGGTTCGTGGTAATTACCTCTCGGTATTCTTGGAACTGACAGCAGGCCTGCCAGAAACCTCAAAGTACGAATATCGAGTAGAAATGGTCCATCACGCCTCACCTGATTCCAGTAGGAATATCGTCAGAGAATTCGCTTCAGATTTTGAGGTCGGTGAATGCTGGGGATATAATCGTTTCTTTCGTCTGGATTTTCTGTGTTTTGGTCTCAAAGAGGATCTAGCGATGACAACAAACGTAGTTATTGCTGTTATTCTTCTGGCATCGATTTCTTTTTGTTTGGGTTTTCATAAACCCTTGAAGATCTCACGACACACCCAAACCTACAAAAGACAGCTGCAGTCACTACCAGAACTAAGAAGTGATCAAGACAAAAGTATCCTAAAAAGAAAGCATGGCGAGACTTTATCTCACATCCATCGTGGGATTGACTCAAATTGGAAAGTGTCATCAGTTCGCCGAACTTCAAGGTCCATTCTCGATCTTGGCACTGGTGAAAAGACATCATATAGCGAGAAGGATCTGGAATTAAATGCAGATGGGATCGCAAATGCGCATATCGAGAGAACACACGACTTAGAAGAGATTGAAATCGAATTAAGAAGCGATTCCAAAGATATTCTTCTTTCAAGACATCGTCGTGGTGTACCTTCTCAACTCATTTGTAATTCAACCTTCCTTTCGTGCAAACACAGATGTCTGGACAGAAGAGACCATGGGGGAGTTGATAAGGAATTACGCTGTTCCTGTGATCCTTATTGCAACTACTTCAAGGACTGTTGTCATGACTACGTAACGTATTGTCTGAAAGATCCAGGATCCTCCCATATCACTTTAAAAGTCCCCGATGAACAATGGTCCTGTCGAAACGGAGTTTGGATGATTACGTTATGTCCCAAGTCTTGGTCAAACCAAAACGTTTGCAAGTCCTGCAGCAATGTCACCATAATGACTCACGTGAATTATGCAAATGTACTGCCTGTCACTACCCCTGACAACAAAACTTTCGCCAATCGATTCTGTGCTCAGTGTCATGGATACCAGCTGAACCAAATGGAGTTTTATCCTCTTGATTCTAAGTGTCTCTTGTCACCATCCAGCAGGGCGACACAAGAAGAACAAATTCAATTTATTTTTAAAAATTGTGATGTGTTTTCCAACTCACCAAAGAATGGTACATTAAGAAGACCTTGCAAGCCCGTGCCCGAGGATGCGTGTACAGATCATTCTGCGACCATTGAAACTCGAGGTAAATGCATAAATGGTTCGTATGGACTCGTGTACATTATCGGGAAAAGACGCACTTTTAAGAACGTATTTTGTGCAAGATGCTGTGGTTTGGATCCAGAAAAACTTGAATCTCGATGTGGACCAGGACCAGGATCAAAAGAATTGAGCTCTACAAAAGGTGGTGCATCAAAACCATTTTCTTTGATATTGGAAATTGGTAAATCGTCTGGACAACAAGCAAAGCAAGTTTCCTTCATAATCTCATGTCCTACTCGAAAAGTTTATGACTGGTATTTAGAAACATGTCGAAAGGGAGAACAATTCGTTCCTGTCGTATCCAACTTCAAAATGTATCGAGTGGCATTCTGGATCAAGTGTATTGGATCCTTTCAAACTCAAGATTTTATTAATTGTATTTCTAAAGAACTTATGGTTAATTCAACAGCATTAACAATTATTGGTTCGACTATCCTTGACAGGAAACAGCGGCTCCTTTTGATTCTATTTGACTTAACCATACCAAAGAACTTTGAAGAAGAACAAACAATGAATGTATTAACTGACCTCTTGAAACTCACTCATTCACCAAAAAAACTCTTCAAAATTGGCTTTTTAAGATTTCAGGCTGTCAAAATTTCTTTCAAACCCCTGACTTGTGTTCTCGCAGACACTTATTCGCCCACGGAATACGATGTAATTTCCGGCACTTCTTCCATCTACATCAACAAAACAGGAGAATTGTTGAACAAGAAAGACTACTTCTCCAACAGTTCAAGAATGGTCCAAGGTCATCCACAGCCTGTAGGGCACATAGTGGTCTGTAGACAAATGCTGTCAGGGAATTGTTCTGGTACCTACATTTTCCTGCAAAGACATGAGTACACTATTTTCCCCAATCGATCTTTGTTATATAATGCGACGGGTCGTCTGTACGAGAATGGAGAGTACACGTGGAGAAATGGAACTGCAGTGGTATGCACATATTTTGCAACCATCTATGAACAGTACAACAAAAGCACTCCAGTGAATGACCCACCTGGTCTAACCATCCTGACGTACATCGGGTTTTCCATATCAGTACTTTGTTTGGTGTTTGTACTGGTCACCTACTCTCTGTTCCCAGCACTGAAAACAATTCCTGGAATCAACTTGATGAACCTCTCCTGTGCTCTGCTTGTGGCACACTTGTTATGGTTGGTAGGATCAGGACTGACATTCACTGGGAAAGTCTGCACCGCCATAGCAATAGTGCTTCATTACAGTTTTCTGGCCTCTTTTATGTGGATGTCCATCATCGCTTTTGACACGTGGAAAGTATTTTCCCATGTCGAATCCTGCCGTTCTTCGAGAAACGAAAAAGCCAAAAAGCGCAAACGCATTGCTTTCACGATGGCAATTGGCTGGCTTCCACTGATAATCTACTTGTCCGTTTGTGTGGCTTTAGATCAATCAGAAGTAGTTGACATTGGATATGGGGGTATAAAAGGCTGCTGGATCAACGACTCGTGGGCGAACCTGTATTTCTTTGCCATACCAGTGGCCGCCTCTATTCTTTGGAATGCAGTGTTTTTCCTCCTTGTTGTGAAATCCATTAGGAAAACAAGAGAACAGTCCCAGATGGTTACTGGCCAATCTCGAAATGATTCAGCAATATACACCAGGATTGCAGTGTTGATGGGGTTCACATGGGTGTTTGGTTTTCTAGCACCGTTTACATCGCAGTATCTAATGTATCCCTTTGTGATTCTCAACACTCTCCAAGGTTTGTACATTGCTGTGGCTTTCTGCTTAACAAAAAGAGTCAGGTTGTTGTATCAAGGCCTTTACTCGGATATGGCTAGTGAAGGATATCTCAATACAGCAAATGATACTCTTATTCTACGATTCCAAGTCAGACCACCAACGTTCTACCAGAAATGCCGTGACCAGCAGTGGTATATCAATCAACTGGAGACTAGTCAACTTCAATACATTCAACAAATGAACGACCTGAAAGAGCGACTAGCGATCGAACTGTCCCGCAACCACCCTGCTCCACCATCGTCCGCTGCTGCATCACCTGATCGAAGTCACGTGTCCCTTCTGGAACAATCGATCGACAACGATGACGAGTCCGCTGACCAGACGGTTACCAAGGAACCAAGAAATAGCGTTAAAAATATTTATGGCAAAAATAGCAGTTGCAATAACGCCAAGAAAACACGCATAGCACTTCATACTGCTATAGACATTGAGTTGGCTACAGGACCAGTTCAGACGTCAGAGGAAGGTGAGGAGATAACTGGTGAAGAGAATGCAATGGACATCGACGAGAACCAGGACGATGTCGACGAAGACGATGACAACGACAGTCGCGATGATACCGACGATGAAACACTCAATGAGTTTGAATGTAATGTGTTAGAAGAAGCCGCTTCTGAGCCTGAACCTGATGGCGTAGTAGAAGAGAAACAAGCTGTCATTCATGACGAAGATCTACAGTCTAAGTCAGACAGTCACTACCTGGCCCAGACGGACGACAGTGAGTGGGAGACACAAGAAGAGGACGAAGAGGGCTGGACCCTAGAGGATGTAGAAGTCGAACTGATAGAACCAGATAACGAAGAGAAAAGAGAGGAAAACGACGAACAGGAAGAAGAAGCTGAAGCGTCTGGAGCGACGAGAGACGCGTTATCGTTCTTCGAACCTGAAGCGCGAGTTTTACTGAATTTAATCAAACTCAGTGAATCGGGGTCCCGCTGGAAGACCAGCAGCCCCACGAGGAAGGCGGTGTCCCTTGTAGAAATGCCACGGTCTGAAGAGAAGGCTGCTTCTAGACGCAGAGCTCGATATGAACGCTGCAGCAGCATGCTGGAGAAGCTGCAGAGTTGTTTAAATCGAGCTGAAGCCAAGAGCTCGGCAGCCGCTTTGGAGAGCATGAAACATCTTGAAGAAGCCATGGCTAACGCAGCCTCGGGATACCCCAAACATTCACGTGATCGAAGACAAAGACGGGGAGCGTCGTTACCAGTTGTCAGTAACAATTCAAGAACCAAGACATCACCTAAAAGAGATTGTGACACCTGTTCCGTGGTACCAGATCCAGACGTAGGGGGTTGTAGCCCAGAGTTAGACACTCAGAACACACCATCCAGTCATAATGTACCCGAGAAAATCGATAGCCCTAATAATAGCAGACAGACAGCACATACAGGTGTCAGAGTCAGAAAGGTAGTCCGATCAAATGGAAACTCTTCTGATATAGGCCGCGATGGTCTGGAAAGAAGCTCACAACTTCTCTCTGAGCTAAAGCGCGCGTCGACGTTAAACAAAGCATACAGGCTTAGCTTCACCAGTCCTGAGGAAGAGGAGTTACTACGTGCCCTAGATACAACATCCAAGAATAAAGAAAATTCAGATTGTGAGGAAAGAGACAGTGTCTTATACGTAAGCACACATTCATCTGATGATGACGAGTTTGCGTCATCTATTACGTCAGACGATCACGTGGTCTCGTCATCCAATGTTGCCGAAGAAAGCTCACCCAATAGCAGTGAGACTAATCGCGATCGCCAAGAAATCAACTGTAGCGACCCTCTGCAAGCAAGGGATATCCAGTAATGTTTGTTAGTTTGTCAATGGAAGCAATGGTAAAACTATTGTCTGTCTTCTGAATTTGTACTGGACATTTGTGTGACGTTTCTAGAGTACTCTATTTCTGTGATTGTTCCCTGGTGAATCTCCAATACCCAGGGTATAGACCCCTTGCAGTAATTCCCTTTCCAGTTTAATTTGGAGGACAAAACAATAGTTCTTCTCTCTCCTGAGAATTGAAAACTTTTCTCATAAAAAAAGGTTGAACCGGAAGAGAATTGGCTGCAAGGGATCTATAATCTACAGTAGAGAAAAACCTTGCTCGAACTCCCTAGGGAAACGATGATTTATTACGCGATAACATGAAGTTCGAGACAAAATAAACGAAATGGGAATTGTGTTCAAAGAAGCGGGGTTCTACTCTACTCATAAATGCAATTCTGGTCCTGGTTGCGCGAATAGTGGATAGTGCTATCCAGTGGATAAATCGTTATGCAGTGGATAATAAATCTATTGCGATATAACAGCATCATTTTATCAACTGGATAAGGAATTATCCAACGGATAGCGCTATCCACTCTTGTGCAACCAGTGCTTGTTCTTTCTAAGGTTTTCAAATGACTAACATTCGTACTACTATGCTCTGTATTGTTGGTTTGCAATGGATGTTACGGCGGCCATCTTGGTTGAACTTCAACAAAGTATTTATATGGTTTGTTCCTCCATCATGGCCGCTGTGTCTTGGTATGGATTGCAAACCAACAATATGCTCTCCATTGTGAGGGGCGTTTCTCAAATCAGTGAAAATAATATCGAAGTAAGAAACAAATTCTTGCAGGTGAAACCCGAAAAACAAATTTCTTGTTAATGACAGGCGTTATACTGTTAATATAGTACTATTTCCAAAACTAACCGATAGAGTACAAACACTAAAAGCGTGCAACACTTTGCACTATTTAGTACTAAATAGCACTAATTAAACAATAGAAAACAATAGAATTTGCATAATTTAGCACTATTTAGTACTATTTATGTTGCACGCTTTTAGTGTTTGTACTCTAGATGTTGAAATGATACCGTTATAATAATATCAGTTGTAATATATTGTTGATGTACATACAGTGAAAACAAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6PCX9	E3 ubiquitin-protein ligase TRIM37 OS=Mus musculus OX=10090 GN=Trim37 PE=1 SV=1
O94972	E3 ubiquitin-protein ligase TRIM37 OS=Homo sapiens OX=9606 GN=TRIM37 PE=1 SV=2
A6QLU6	Adhesion G-protein coupled receptor D1 OS=Bos taurus OX=9913 GN=ADGRD1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003743 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00002 all species →	7tm_2	7 transmembrane receptor (Secretin family)	Family	Interproscan
PF01033 all species →	Somatomedin_B	Somatomedin B domain	Family	Interproscan
PF00643 all species →	zf-B_box	B-box zinc finger	Domain	Interproscan
PF00917 all species →	MATH	MATH domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000832 all species →	Family	GPCR, family 2, secretin-like	Interproscan
IPR008974 all species →	Homologous_superfamily	TRAF-like	Interproscan
IPR001212 all species →	Domain	Somatomedin B domain	Interproscan
IPR000315 all species →	Domain	B-box-type zinc finger	Interproscan
IPR003649 all species →	Domain	B-box, C-terminal	Interproscan
IPR002083 all species →	Domain	MATH/TRAF domain	Interproscan
IPR017981 all species →	Domain	GPCR, family 2-like, 7TM	Interproscan
IPR036024 all species →	Homologous_superfamily	Somatomedin B-like domain superfamily	Interproscan
IPR053003 all species →	Family	TRIM/RBCC E3 ubiquitin-protein ligases	Interproscan
IPR013083 all species →	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841 all species →	Domain	Zinc finger, RING-type	Interproscan
IPR037299 all species →	Domain	TRIM37, MATH domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR36754 all species →	E3 UBIQUITIN-PROTEIN LIGASE TRIM37	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004930 all species →	Molecular Function	G protein-coupled receptor activity	Interproscan
GO:0007186 all species →	Biological Process	G protein-coupled receptor signaling pathway	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0004888 all species →	Molecular Function	transmembrane signaling receptor activity	Interproscan
GO:0007166 all species →	Biological Process	cell surface receptor signaling pathway	Interproscan
GO:0005164 all species →	Molecular Function	tumor necrosis factor receptor binding	Interproscan
GO:0005777 all species →	Cellular Component	peroxisome	Interproscan
GO:0016235 all species →	Cellular Component	aggresome	Interproscan
GO:0031625 all species →	Molecular Function	ubiquitin protein ligase binding	Interproscan
GO:0032088 all species →	Biological Process	negative regulation of NF-kappaB transcription factor activity	Interproscan
GO:0046600 all species →	Biological Process	negative regulation of centriole replication	Interproscan
GO:0051092 all species →	Biological Process	positive regulation of NF-kappaB transcription factor activity	Interproscan
GO:0051865 all species →	Biological Process	protein autoubiquitination	Interproscan
GO:0061630 all species →	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0016567 all species →	Biological Process	protein ubiquitination	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for gene07291.t2.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.

Co-expression network

Genes whose expression across the transcriptome samples of Actinoscyphia liui tracks this one. Counts are over the whole network; the network view itself draws at most 100 partners per query gene (CNIDO_NET_TOP_K), so a hub gene can show fewer edges than the number below.

No co-expression network has been built for this species, so this gene has no partners to show. Networks are available for the species listed on the Network Analysis page.

Single-cell expression

Whether this gene can be visualised in the single-cell atlases of Actinoscyphia liui, and in which cell types it is a marker. Expression is stored per cell, so the violin plot and the cell-type means are computed in the viewer — open a dataset to see them.

No single-cell dataset has been published for this species. The atlases that do exist are listed in the Cell Atlas.

Epigenetic marks

Chromatin and DNA-methylation data covering this gene. Peak calls are listed per sample with the genomic region the peak falls in; DNA methylation is listed as sample availability only, because those tables are queried by the DNA Methylation page itself.

No epigenomic data has been deposited for this species. The assays that exist across the site are described in the Epigenomic Data module.

What you can do with this gene

Every tool below opens with this gene already entered, so you land on the analysis rather than on an empty form. Links open in a new tab.

Analysis	What it does	Status
Primer design	Design PCR / qPCR primers on this gene’s sequence with the published primer3 settings. Opens with the primers already computed.	template found	open →
BLAST	Search this gene’s sequence against the CnidoSite BLAST databases. The query is filled in and the species’ database is preselected — press Run to start.	template found	open →
Expression heatmap	Draw this gene’s expression as a heatmap across all RNA-seq samples, and compare it with the genes you add next to it.	no expression matrix	–
Gene family / orthogroup	Look this gene up in the single-copy orthogroups built from the high-quality cnidarian genomes, and see which other species carry an orthologue.		open →
Gene set analysis	Start a gene-set enrichment analysis with this gene as the seed list. Add more genes on that page before running it.		open →