Detailed information of gene07371.t1 in Actinoscyphia liui

Genomic Location: chr2:46229129...46251285
NR annotation: PFX26436.1, Fibropellin-1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O18733Matrix metalloproteinase-9 OS=Canis lupus familiaris OX=9615 GN=MMP9 PE=2 SV=2
P3343672 kDa type IV collagenase OS=Rattus norvegicus OX=10116 GN=Mmp2 PE=1 SV=2
P5075772 kDa type IV collagenase OS=Oryctolagus cuniculus OX=9986 GN=MMP2 PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00040fn2Fibronectin type II domainDomainInterproscan
PF00008EGFEGF-like domainDomainInterproscan
PF01822WSCWSC domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000562DomainFibronectin type II domainInterproscan
IPR013806Homologous_superfamilyKringle-like foldInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR051666FamilySeminal Plasma Capacitation RegulatorInterproscan
IPR000742DomainEGF-like domainInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR036943Homologous_superfamilyFibronectin type II domain superfamilyInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR22918SEMINAL PLASMA PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0008201Molecular Functionheparin bindingInterproscan
GO:0009986Cellular Componentcell surfaceInterproscan
GO:0048240Biological Processsperm capacitationInterproscan

TOP