Detailed information of gene07479.t1 in Actinoscyphia liui

Genomic Location: chr2:48510169...48510465
NR annotation: EDO47237.1, predicted protein, partial [Nematostella vectensis]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
C0HK23L-rhamnose-binding lectin SML OS=Scomberomorus niphonius OX=321164 PE=1 SV=1
P22031D-galactoside-specific lectin OS=Heliocidaris crassispina OX=1043166 PE=1 SV=1
P86179L-rhamnose-binding lectin CSL3 OS=Oncorhynchus keta OX=8018 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000356 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02140
all species →		Gal_LectinGalactose binding lectin domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000922
all species →		DomainD-galactoside/L-rhamnose binding SUEL lectin domainInterproscan
IPR043159
all species →		Homologous_superfamilyD-galactoside/L-rhamnose binding SUEL lectin domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46780
all species →		PROTEIN EVA-1Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0030246
all species →		Molecular Functioncarbohydrate bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene07479.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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