Gene detail

Detailed information of gene07665.t2 in Actinoscyphia liui

Genomic Location: chr2:51302460...51318611
NR annotation: XP_028516866.1, ornithine decarboxylase [Exaiptasia diaphana]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q54UF3	Probable ornithine decarboxylase OS=Dictyostelium discoideum OX=44689 GN=odc PE=3 SV=1
P27121	Ornithine decarboxylase OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) OX=367110 GN=spe-1 PE=2 SV=1
P40807	Ornithine decarboxylase 1 OS=Drosophila melanogaster OX=7227 GN=Odc1 PE=2 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02784	Orn_Arg_deC_N	Pyridoxal-dependent decarboxylase, pyridoxal binding domain	Domain	Interproscan
PF00278	Orn_DAP_Arg_deC	Pyridoxal-dependent decarboxylase, C-terminal sheet domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009006	Homologous_superfamily	Alanine racemase/group IV decarboxylase, C-terminal	Interproscan
IPR022644	Domain	Orn/DAP/Arg decarboxylase 2, N-terminal	Interproscan
IPR029066	Homologous_superfamily	PLP-binding barrel	Interproscan
IPR000183	Family	Ornithine/DAP/Arg decarboxylase	Interproscan
IPR002433	Family	Ornithine decarboxylase	Interproscan
IPR022643	Domain	Orn/DAP/Arg decarboxylase 2, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11482	ARGININE/DIAMINOPIMELATE/ORNITHINE DECARBOXYLASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0004586	Molecular Function	ornithine decarboxylase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006596	Biological Process	polyamine biosynthetic process	Interproscan
GO:0033387	Biological Process	putrescine biosynthetic process from ornithine	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K01581	E4.1.1.17, ODC1, speC, speF; ornithine decarboxylase	EC:4.1.1.17	Efferocytosis	ko04148	deepkoala