Detailed information of gene07940.t1 in Actinoscyphia liui

Genomic Location: chr2:56042174...56073183
NR annotation: KXJ07855.1, Nucleolar protein 10 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7T0Q5Nucleolar protein 10 OS=Xenopus laevis OX=8355 GN=nol10 PE=2 SV=1
Q6NVM6Nucleolar protein 10 OS=Xenopus tropicalis OX=8364 GN=nol10 PE=2 SV=1
Q9BSC4Nucleolar protein 10 OS=Homo sapiens OX=9606 GN=NOL10 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0004350 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species

 Pfam domain
No Pfam domain signature was detected for gene07940.t1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR040382
all species →		FamilyNucleolar protein 10/Enp2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14927
all species →		UNCHARACTERIZEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000462
all species →		Biological Processmaturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)Interproscan
GO:0005730
all species →		Cellular ComponentnucleolusInterproscan
GO:0030686
all species →		Cellular Component90S preribosomeInterproscan
GO:0032040
all species →		Cellular Componentsmall-subunit processomeInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K14788NOL10, ENP2; ribosome biogenesis protein ENP2-Ribosome biogenesisko03009deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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