Detailed information of gene08087.t1 in Actinoscyphia liui

Genomic Location: chr11:1438377...1446327
NR annotation: KXJ06904.1, Transposon TX1 uncharacterized 149 kDa protein [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
G5ECE8Chondroitin hydrolase OS=Caenorhabditis elegans OX=6239 GN=chhy-1 PE=1 SV=1
Q62803Hyaluronidase PH-20 OS=Rattus norvegicus OX=10116 GN=Spam1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000039 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01630
all species →
Glyco_hydro_56HyaluronidaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR018155
all species →
FamilyHyaluronidaseInterproscan
IPR052343
all species →
FamilyDiverse Retrotransposon and Effector-Associated ProteinInterproscan
IPR013785
all species →
Homologous_superfamilyAldolase-type TIM barrelInterproscan
IPR043502
all species →
Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR017853
all species →
Homologous_superfamilyGlycoside hydrolase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46890
all species →
NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004415
all species →
Molecular Functionhyalurononglucosaminidase activityInterproscan
GO:0005975
all species →
Biological Processcarbohydrate metabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene08087.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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