Detailed information of gene08092.t1 in Actinoscyphia liui

Genomic Location: chr11:1608456...1615942
NR annotation: XP_031559064.1, uncharacterized protein LOC116295409 [Actinia tenebrosa]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P98160Basement membrane-specific heparan sulfate proteoglycan core protein OS=Homo sapiens OX=9606 GN=HSPG2 PE=1 SV=4
Q6AZB0Brother of CDO OS=Mus musculus OX=10090 GN=Boc PE=1 SV=2
Q9BWV1Brother of CDO OS=Homo sapiens OX=9606 GN=BOC PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01391CollagenCollagen triple helix repeat (20 copies)RepeatInterproscan
PF07679I-setImmunoglobulin I-set domainDomainInterproscan
PF07534TLDTLDDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR003598DomainImmunoglobulin subtype 2Interproscan
IPR051170FamilyNeural and epithelial cell adhesion domain-containing proteinInterproscan
IPR036179Homologous_superfamilyImmunoglobulin-like domain superfamilyInterproscan
IPR007110DomainImmunoglobulin-like domainInterproscan
IPR008160RepeatCollagen triple helix repeatInterproscan
IPR013098DomainImmunoglobulin I-setInterproscan
IPR003599DomainImmunoglobulin subtypeInterproscan
IPR006571DomainTLDc domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12231CTX-RELATED TYPE I TRANSMEMBRANE PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
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 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K05175GABRA; gamma-aminobutyric acid receptor subunit alpha-Ion channelsko04040deepkoala

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