Gene detail

Detailed information of gene08137.t2 in Actinoscyphia liui

Genomic Location: chr11:2536587...2540297
NR annotation: KXJ16478.1, 60S ribosomal protein L27a [Exaiptasia diaphana]
Species abbreviation ALIUI · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q56K03	Large ribosomal subunit protein uL15 OS=Bos taurus OX=9913 GN=RPL27A PE=2 SV=3
P46776	Large ribosomal subunit protein uL15 OS=Homo sapiens OX=9606 GN=RPL27A PE=1 SV=2
Q5REY2	Large ribosomal subunit protein uL15 OS=Pongo abelii OX=9601 GN=RPL27A PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006093 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00828 all species →	Ribosomal_L27A	Ribosomal proteins 50S-L15, 50S-L18e, 60S-L27A	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR030878 all species →	Family	Large ribosomal subunit protein uL15	Interproscan
IPR021131 all species →	Domain	Large ribosomal subunit protein uL15/eL18	Interproscan
IPR001196 all species →	Conserved_site	Large ribosomal subunit protein uL15, conserved site	Interproscan
IPR027386 all species →	Homologous_superfamily	Ribosomal uL15, N-terminal	Interproscan
IPR036227 all species →	Homologous_superfamily	Large ribosomal subunit protein uL15/eL18 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11721 all species →	60S RIBOSOMAL PROTEIN L27A	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015934 all species →	Cellular Component	large ribosomal subunit	Interproscan
GO:0022625 all species →	Cellular Component	cytosolic large ribosomal subunit	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02900	RP-L27Ae, RPL27A; large subunit ribosomal protein L27Ae	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.