Detailed information of gene08142.t1 in Actinoscyphia liui

Genomic Location: chr11:2675997...2680304
NR annotation: KAJ8041903.1, hypothetical protein HOLleu_12832 [Holothuria leucospilota]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P27502Polyprotein P3 OS=Rice tungro bacilliform virus (isolate Philippines) OX=10655 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37984PROTEIN CBG26694Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan

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