Detailed information of gene08330.t1 in Actinoscyphia liui

Genomic Location: chr11:6648722...6653384
NR annotation: XP_020914928.1, myc proto-oncogene protein isoform X1 [Exaiptasia diaphana]
Species Actinoscyphia liui · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P22555Myc proto-oncogene protein OS=Marmota monax OX=9995 GN=MYC PE=2 SV=2
P49032Myc proto-oncogene protein OS=Callithrix jacchus OX=9483 GN=MYC PE=3 SV=1
Q9MZU0Myc proto-oncogene protein OS=Galeopterus variegatus OX=482537 GN=MYC PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000933 (this species only) · gene tree & orthology
Transcription factor familybHLH · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00010
all species →		HLHHelix-loop-helix DNA-binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR002418
all species →		FamilyTranscription regulator MycInterproscan
IPR011598
all species →		DomainMyc-type, basic helix-loop-helix (bHLH) domainInterproscan
IPR036638
all species →		Homologous_superfamilyHelix-loop-helix DNA-binding domain superfamilyInterproscan
IPR050433
all species →		FamilyMyc family transcription factorsInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR45851
all species →		MYC PROTO-ONCOGENEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003700
all species →		Molecular FunctionDNA-binding transcription factor activityInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0046983
all species →		Molecular Functionprotein dimerization activityInterproscan
GO:0000978
all species →		Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357
all species →		Biological Processregulation of transcription by RNA polymerase IIInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for gene08330.t1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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